Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16162 | 48709;48710;48711 | chr2:178615461;178615460;178615459 | chr2:179480188;179480187;179480186 |
N2AB | 14521 | 43786;43787;43788 | chr2:178615461;178615460;178615459 | chr2:179480188;179480187;179480186 |
N2A | 13594 | 41005;41006;41007 | chr2:178615461;178615460;178615459 | chr2:179480188;179480187;179480186 |
N2B | 7097 | 21514;21515;21516 | chr2:178615461;178615460;178615459 | chr2:179480188;179480187;179480186 |
Novex-1 | 7222 | 21889;21890;21891 | chr2:178615461;178615460;178615459 | chr2:179480188;179480187;179480186 |
Novex-2 | 7289 | 22090;22091;22092 | chr2:178615461;178615460;178615459 | chr2:179480188;179480187;179480186 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1240591275 | -0.708 | None | N | 0.265 | 0.073 | 0.216624796971 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
V/L | rs1240591275 | None | None | N | 0.281 | 0.036 | 0.166414681773 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/L | rs1240591275 | None | None | N | 0.281 | 0.036 | 0.166414681773 | gnomAD-4.0.0 | 3.04565E-06 | None | None | None | None | N | None | 5.24494E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8695 | likely_pathogenic | 0.8424 | pathogenic | -1.864 | Destabilizing | 0.052 | N | 0.712 | prob.delet. | N | 0.5113697 | None | None | N |
V/C | 0.9338 | likely_pathogenic | 0.9292 | pathogenic | -1.65 | Destabilizing | 0.935 | D | 0.73 | prob.delet. | None | None | None | None | N |
V/D | 0.9941 | likely_pathogenic | 0.9911 | pathogenic | -2.435 | Highly Destabilizing | 0.741 | D | 0.813 | deleterious | D | 0.641084948 | None | None | N |
V/E | 0.9833 | likely_pathogenic | 0.9763 | pathogenic | -2.336 | Highly Destabilizing | 0.555 | D | 0.777 | deleterious | None | None | None | None | N |
V/F | 0.8316 | likely_pathogenic | 0.7225 | pathogenic | -1.311 | Destabilizing | 0.188 | N | 0.781 | deleterious | N | 0.487233112 | None | None | N |
V/G | 0.9059 | likely_pathogenic | 0.8831 | pathogenic | -2.29 | Highly Destabilizing | 0.484 | N | 0.795 | deleterious | D | 0.642401848 | None | None | N |
V/H | 0.9952 | likely_pathogenic | 0.9929 | pathogenic | -2.004 | Highly Destabilizing | 0.935 | D | 0.797 | deleterious | None | None | None | None | N |
V/I | 0.0993 | likely_benign | 0.0923 | benign | -0.731 | Destabilizing | None | N | 0.265 | neutral | N | 0.48873291 | None | None | N |
V/K | 0.9866 | likely_pathogenic | 0.9809 | pathogenic | -1.538 | Destabilizing | 0.555 | D | 0.769 | deleterious | None | None | None | None | N |
V/L | 0.3095 | likely_benign | 0.2288 | benign | -0.731 | Destabilizing | None | N | 0.281 | neutral | N | 0.362882553 | None | None | N |
V/M | 0.5655 | likely_pathogenic | 0.47 | ambiguous | -0.776 | Destabilizing | 0.235 | N | 0.711 | prob.delet. | None | None | None | None | N |
V/N | 0.9795 | likely_pathogenic | 0.9745 | pathogenic | -1.605 | Destabilizing | 0.791 | D | 0.82 | deleterious | None | None | None | None | N |
V/P | 0.8383 | likely_pathogenic | 0.8207 | pathogenic | -1.078 | Destabilizing | 0.791 | D | 0.776 | deleterious | None | None | None | None | N |
V/Q | 0.9816 | likely_pathogenic | 0.9744 | pathogenic | -1.652 | Destabilizing | 0.791 | D | 0.779 | deleterious | None | None | None | None | N |
V/R | 0.9806 | likely_pathogenic | 0.9711 | pathogenic | -1.211 | Destabilizing | 0.555 | D | 0.821 | deleterious | None | None | None | None | N |
V/S | 0.9647 | likely_pathogenic | 0.9561 | pathogenic | -2.156 | Highly Destabilizing | 0.555 | D | 0.779 | deleterious | None | None | None | None | N |
V/T | 0.8537 | likely_pathogenic | 0.8416 | pathogenic | -1.934 | Destabilizing | 0.149 | N | 0.735 | prob.delet. | None | None | None | None | N |
V/W | 0.9955 | likely_pathogenic | 0.9906 | pathogenic | -1.688 | Destabilizing | 0.935 | D | 0.797 | deleterious | None | None | None | None | N |
V/Y | 0.9851 | likely_pathogenic | 0.9747 | pathogenic | -1.345 | Destabilizing | 0.555 | D | 0.768 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.