Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16168 | 48727;48728;48729 | chr2:178615443;178615442;178615441 | chr2:179480170;179480169;179480168 |
N2AB | 14527 | 43804;43805;43806 | chr2:178615443;178615442;178615441 | chr2:179480170;179480169;179480168 |
N2A | 13600 | 41023;41024;41025 | chr2:178615443;178615442;178615441 | chr2:179480170;179480169;179480168 |
N2B | 7103 | 21532;21533;21534 | chr2:178615443;178615442;178615441 | chr2:179480170;179480169;179480168 |
Novex-1 | 7228 | 21907;21908;21909 | chr2:178615443;178615442;178615441 | chr2:179480170;179480169;179480168 |
Novex-2 | 7295 | 22108;22109;22110 | chr2:178615443;178615442;178615441 | chr2:179480170;179480169;179480168 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | rs375878254 | -0.412 | 0.984 | D | 0.495 | 0.536 | 0.368743488249 | gnomAD-4.0.0 | 2.55139E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 2.0761E-04 | 2.42248E-04 | 2.86438E-06 | 0 | 9.09863E-05 |
T/R | None | None | 0.968 | N | 0.519 | 0.357 | 0.431035450679 | gnomAD-4.0.0 | 1.59456E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86453E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2672 | likely_benign | 0.3663 | ambiguous | -0.765 | Destabilizing | 0.64 | D | 0.458 | neutral | D | 0.545514098 | None | None | N |
T/C | 0.649 | likely_pathogenic | 0.7792 | pathogenic | -0.726 | Destabilizing | 0.999 | D | 0.519 | neutral | None | None | None | None | N |
T/D | 0.5336 | ambiguous | 0.6131 | pathogenic | -1.203 | Destabilizing | 0.919 | D | 0.51 | neutral | None | None | None | None | N |
T/E | 0.6746 | likely_pathogenic | 0.7527 | pathogenic | -1.201 | Destabilizing | 0.919 | D | 0.513 | neutral | None | None | None | None | N |
T/F | 0.7626 | likely_pathogenic | 0.8442 | pathogenic | -1.134 | Destabilizing | 0.996 | D | 0.586 | neutral | None | None | None | None | N |
T/G | 0.2963 | likely_benign | 0.4003 | ambiguous | -0.982 | Destabilizing | 0.851 | D | 0.499 | neutral | None | None | None | None | N |
T/H | 0.4184 | ambiguous | 0.4982 | ambiguous | -1.396 | Destabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | N |
T/I | 0.8398 | likely_pathogenic | 0.8946 | pathogenic | -0.281 | Destabilizing | 0.984 | D | 0.505 | neutral | D | 0.619368542 | None | None | N |
T/K | 0.2997 | likely_benign | 0.3505 | ambiguous | -0.735 | Destabilizing | 0.896 | D | 0.509 | neutral | N | 0.474096046 | None | None | N |
T/L | 0.4377 | ambiguous | 0.5353 | ambiguous | -0.281 | Destabilizing | 0.919 | D | 0.497 | neutral | None | None | None | None | N |
T/M | 0.3122 | likely_benign | 0.383 | ambiguous | 0.173 | Stabilizing | 0.999 | D | 0.521 | neutral | None | None | None | None | N |
T/N | 0.1801 | likely_benign | 0.208 | benign | -0.909 | Destabilizing | 0.919 | D | 0.475 | neutral | None | None | None | None | N |
T/P | 0.8087 | likely_pathogenic | 0.8328 | pathogenic | -0.413 | Destabilizing | 0.984 | D | 0.495 | neutral | D | 0.658312772 | None | None | N |
T/Q | 0.4042 | ambiguous | 0.4991 | ambiguous | -1.206 | Destabilizing | 0.988 | D | 0.525 | neutral | None | None | None | None | N |
T/R | 0.3323 | likely_benign | 0.4032 | ambiguous | -0.427 | Destabilizing | 0.968 | D | 0.519 | neutral | N | 0.474315199 | None | None | N |
T/S | 0.1072 | likely_benign | 0.1383 | benign | -1.039 | Destabilizing | 0.046 | N | 0.157 | neutral | N | 0.462214267 | None | None | N |
T/V | 0.648 | likely_pathogenic | 0.7326 | pathogenic | -0.413 | Destabilizing | 0.919 | D | 0.471 | neutral | None | None | None | None | N |
T/W | 0.9133 | likely_pathogenic | 0.9501 | pathogenic | -1.121 | Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
T/Y | 0.6729 | likely_pathogenic | 0.7743 | pathogenic | -0.797 | Destabilizing | 0.996 | D | 0.592 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.