Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16169 | 48730;48731;48732 | chr2:178615440;178615439;178615438 | chr2:179480167;179480166;179480165 |
N2AB | 14528 | 43807;43808;43809 | chr2:178615440;178615439;178615438 | chr2:179480167;179480166;179480165 |
N2A | 13601 | 41026;41027;41028 | chr2:178615440;178615439;178615438 | chr2:179480167;179480166;179480165 |
N2B | 7104 | 21535;21536;21537 | chr2:178615440;178615439;178615438 | chr2:179480167;179480166;179480165 |
Novex-1 | 7229 | 21910;21911;21912 | chr2:178615440;178615439;178615438 | chr2:179480167;179480166;179480165 |
Novex-2 | 7296 | 22111;22112;22113 | chr2:178615440;178615439;178615438 | chr2:179480167;179480166;179480165 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.008 | N | 0.397 | 0.111 | 0.225902525712 | gnomAD-4.0.0 | 1.59423E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86434E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4734 | ambiguous | 0.5329 | ambiguous | -1.11 | Destabilizing | 0.989 | D | 0.605 | neutral | None | None | None | None | N |
A/D | 0.6368 | likely_pathogenic | 0.682 | pathogenic | -1.79 | Destabilizing | 0.901 | D | 0.62 | neutral | N | 0.461963488 | None | None | N |
A/E | 0.4031 | ambiguous | 0.4475 | ambiguous | -1.892 | Destabilizing | 0.775 | D | 0.644 | neutral | None | None | None | None | N |
A/F | 0.6423 | likely_pathogenic | 0.6838 | pathogenic | -1.365 | Destabilizing | 0.961 | D | 0.627 | neutral | None | None | None | None | N |
A/G | 0.1254 | likely_benign | 0.1468 | benign | -0.868 | Destabilizing | 0.349 | N | 0.621 | neutral | N | 0.482193121 | None | None | N |
A/H | 0.5985 | likely_pathogenic | 0.6382 | pathogenic | -0.843 | Destabilizing | 0.996 | D | 0.626 | neutral | None | None | None | None | N |
A/I | 0.4798 | ambiguous | 0.5307 | ambiguous | -0.601 | Destabilizing | 0.858 | D | 0.599 | neutral | None | None | None | None | N |
A/K | 0.2915 | likely_benign | 0.312 | benign | -0.946 | Destabilizing | 0.775 | D | 0.637 | neutral | None | None | None | None | N |
A/L | 0.3831 | ambiguous | 0.4174 | ambiguous | -0.601 | Destabilizing | 0.633 | D | 0.632 | neutral | None | None | None | None | N |
A/M | 0.4254 | ambiguous | 0.469 | ambiguous | -0.415 | Destabilizing | 0.989 | D | 0.588 | neutral | None | None | None | None | N |
A/N | 0.4238 | ambiguous | 0.4817 | ambiguous | -0.829 | Destabilizing | 0.923 | D | 0.611 | neutral | None | None | None | None | N |
A/P | 0.3532 | ambiguous | 0.4417 | ambiguous | -0.618 | Destabilizing | 0.949 | D | 0.591 | neutral | N | 0.48146409 | None | None | N |
A/Q | 0.3433 | ambiguous | 0.3761 | ambiguous | -1.195 | Destabilizing | 0.961 | D | 0.619 | neutral | None | None | None | None | N |
A/R | 0.2996 | likely_benign | 0.3043 | benign | -0.448 | Destabilizing | 0.923 | D | 0.59 | neutral | None | None | None | None | N |
A/S | 0.1024 | likely_benign | 0.11 | benign | -1.0 | Destabilizing | 0.014 | N | 0.214 | neutral | N | 0.442470087 | None | None | N |
A/T | 0.1607 | likely_benign | 0.1756 | benign | -1.041 | Destabilizing | 0.008 | N | 0.397 | neutral | N | 0.471435902 | None | None | N |
A/V | 0.2537 | likely_benign | 0.2904 | benign | -0.618 | Destabilizing | 0.565 | D | 0.653 | neutral | D | 0.535376177 | None | None | N |
A/W | 0.8932 | likely_pathogenic | 0.9047 | pathogenic | -1.537 | Destabilizing | 0.996 | D | 0.671 | neutral | None | None | None | None | N |
A/Y | 0.7078 | likely_pathogenic | 0.7455 | pathogenic | -1.146 | Destabilizing | 0.961 | D | 0.639 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.