Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16173 | 48742;48743;48744 | chr2:178615428;178615427;178615426 | chr2:179480155;179480154;179480153 |
N2AB | 14532 | 43819;43820;43821 | chr2:178615428;178615427;178615426 | chr2:179480155;179480154;179480153 |
N2A | 13605 | 41038;41039;41040 | chr2:178615428;178615427;178615426 | chr2:179480155;179480154;179480153 |
N2B | 7108 | 21547;21548;21549 | chr2:178615428;178615427;178615426 | chr2:179480155;179480154;179480153 |
Novex-1 | 7233 | 21922;21923;21924 | chr2:178615428;178615427;178615426 | chr2:179480155;179480154;179480153 |
Novex-2 | 7300 | 22123;22124;22125 | chr2:178615428;178615427;178615426 | chr2:179480155;179480154;179480153 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.999 | N | 0.512 | 0.436 | 0.431712495121 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
F/S | rs1576472588 | None | 1.0 | N | 0.766 | 0.48 | 0.744465519958 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.7129 | likely_pathogenic | 0.7947 | pathogenic | -2.713 | Highly Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
F/C | 0.481 | ambiguous | 0.5767 | pathogenic | -1.416 | Destabilizing | 1.0 | D | 0.825 | deleterious | N | 0.478657193 | None | None | N |
F/D | 0.9186 | likely_pathogenic | 0.9466 | pathogenic | -1.857 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
F/E | 0.9154 | likely_pathogenic | 0.9438 | pathogenic | -1.76 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
F/G | 0.8937 | likely_pathogenic | 0.9251 | pathogenic | -3.062 | Highly Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
F/H | 0.5591 | ambiguous | 0.6423 | pathogenic | -1.237 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
F/I | 0.3511 | ambiguous | 0.4368 | ambiguous | -1.633 | Destabilizing | 1.0 | D | 0.653 | neutral | N | 0.44269466 | None | None | N |
F/K | 0.8811 | likely_pathogenic | 0.9212 | pathogenic | -1.487 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
F/L | 0.8608 | likely_pathogenic | 0.8961 | pathogenic | -1.633 | Destabilizing | 0.999 | D | 0.512 | neutral | N | 0.428616841 | None | None | N |
F/M | 0.6302 | likely_pathogenic | 0.7136 | pathogenic | -1.264 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
F/N | 0.7448 | likely_pathogenic | 0.8153 | pathogenic | -1.522 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
F/P | 0.9958 | likely_pathogenic | 0.9977 | pathogenic | -1.992 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
F/Q | 0.8144 | likely_pathogenic | 0.8696 | pathogenic | -1.684 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
F/R | 0.7954 | likely_pathogenic | 0.8442 | pathogenic | -0.705 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
F/S | 0.4979 | ambiguous | 0.5956 | pathogenic | -2.316 | Highly Destabilizing | 1.0 | D | 0.766 | deleterious | N | 0.443893568 | None | None | N |
F/T | 0.5229 | ambiguous | 0.6211 | pathogenic | -2.13 | Highly Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
F/V | 0.3311 | likely_benign | 0.417 | ambiguous | -1.992 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.441413655 | None | None | N |
F/W | 0.613 | likely_pathogenic | 0.6738 | pathogenic | -0.59 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
F/Y | 0.1898 | likely_benign | 0.2119 | benign | -0.856 | Destabilizing | 0.999 | D | 0.455 | neutral | N | 0.47559197 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.