Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1619 | 5080;5081;5082 | chr2:178777009;178777008;178777007 | chr2:179641736;179641735;179641734 |
N2AB | 1619 | 5080;5081;5082 | chr2:178777009;178777008;178777007 | chr2:179641736;179641735;179641734 |
N2A | 1619 | 5080;5081;5082 | chr2:178777009;178777008;178777007 | chr2:179641736;179641735;179641734 |
N2B | 1573 | 4942;4943;4944 | chr2:178777009;178777008;178777007 | chr2:179641736;179641735;179641734 |
Novex-1 | 1573 | 4942;4943;4944 | chr2:178777009;178777008;178777007 | chr2:179641736;179641735;179641734 |
Novex-2 | 1573 | 4942;4943;4944 | chr2:178777009;178777008;178777007 | chr2:179641736;179641735;179641734 |
Novex-3 | 1619 | 5080;5081;5082 | chr2:178777009;178777008;178777007 | chr2:179641736;179641735;179641734 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.91 | N | 0.443 | 0.115 | 0.107399877778 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0688 | likely_benign | 0.0669 | benign | -0.555 | Destabilizing | 0.91 | D | 0.443 | neutral | N | 0.45492946 | None | None | N |
S/C | 0.121 | likely_benign | 0.1104 | benign | -0.39 | Destabilizing | 1.0 | D | 0.542 | neutral | N | 0.495447226 | None | None | N |
S/D | 0.355 | ambiguous | 0.2811 | benign | -0.144 | Destabilizing | 0.97 | D | 0.454 | neutral | None | None | None | None | N |
S/E | 0.423 | ambiguous | 0.3583 | ambiguous | -0.205 | Destabilizing | 0.942 | D | 0.449 | neutral | None | None | None | None | N |
S/F | 0.1619 | likely_benign | 0.1481 | benign | -1.021 | Destabilizing | 0.998 | D | 0.655 | neutral | D | 0.53508549 | None | None | N |
S/G | 0.1094 | likely_benign | 0.097 | benign | -0.722 | Destabilizing | 0.985 | D | 0.439 | neutral | None | None | None | None | N |
S/H | 0.2689 | likely_benign | 0.2473 | benign | -1.292 | Destabilizing | 0.999 | D | 0.512 | neutral | None | None | None | None | N |
S/I | 0.1874 | likely_benign | 0.1635 | benign | -0.234 | Destabilizing | 0.991 | D | 0.649 | neutral | None | None | None | None | N |
S/K | 0.5228 | ambiguous | 0.4446 | ambiguous | -0.572 | Destabilizing | 0.942 | D | 0.432 | neutral | None | None | None | None | N |
S/L | 0.1024 | likely_benign | 0.0938 | benign | -0.234 | Destabilizing | 0.97 | D | 0.531 | neutral | None | None | None | None | N |
S/M | 0.1716 | likely_benign | 0.1642 | benign | 0.148 | Stabilizing | 1.0 | D | 0.513 | neutral | None | None | None | None | N |
S/N | 0.1254 | likely_benign | 0.1065 | benign | -0.403 | Destabilizing | 0.985 | D | 0.5 | neutral | None | None | None | None | N |
S/P | 0.6565 | likely_pathogenic | 0.576 | pathogenic | -0.31 | Destabilizing | 0.998 | D | 0.519 | neutral | N | 0.452729397 | None | None | N |
S/Q | 0.3792 | ambiguous | 0.3512 | ambiguous | -0.676 | Destabilizing | 0.746 | D | 0.255 | neutral | None | None | None | None | N |
S/R | 0.441 | ambiguous | 0.3729 | ambiguous | -0.378 | Destabilizing | 0.991 | D | 0.459 | neutral | None | None | None | None | N |
S/T | 0.0756 | likely_benign | 0.0728 | benign | -0.476 | Destabilizing | 0.248 | N | 0.239 | neutral | N | 0.447008665 | None | None | N |
S/V | 0.1588 | likely_benign | 0.1464 | benign | -0.31 | Destabilizing | 0.97 | D | 0.526 | neutral | None | None | None | None | N |
S/W | 0.3672 | ambiguous | 0.3267 | benign | -0.978 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
S/Y | 0.1568 | likely_benign | 0.1395 | benign | -0.709 | Destabilizing | 0.998 | D | 0.653 | neutral | D | 0.534897754 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.