Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16190 | 48793;48794;48795 | chr2:178615377;178615376;178615375 | chr2:179480104;179480103;179480102 |
N2AB | 14549 | 43870;43871;43872 | chr2:178615377;178615376;178615375 | chr2:179480104;179480103;179480102 |
N2A | 13622 | 41089;41090;41091 | chr2:178615377;178615376;178615375 | chr2:179480104;179480103;179480102 |
N2B | 7125 | 21598;21599;21600 | chr2:178615377;178615376;178615375 | chr2:179480104;179480103;179480102 |
Novex-1 | 7250 | 21973;21974;21975 | chr2:178615377;178615376;178615375 | chr2:179480104;179480103;179480102 |
Novex-2 | 7317 | 22174;22175;22176 | chr2:178615377;178615376;178615375 | chr2:179480104;179480103;179480102 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs1294316721 | -2.711 | 1.0 | D | 0.818 | 0.814 | 0.822129434029 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
Y/H | rs1294316721 | -2.711 | 1.0 | D | 0.818 | 0.814 | 0.822129434029 | gnomAD-4.0.0 | 1.59374E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4339E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9986 | likely_pathogenic | 0.9978 | pathogenic | -3.555 | Highly Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
Y/C | 0.9637 | likely_pathogenic | 0.9462 | pathogenic | -1.981 | Destabilizing | 1.0 | D | 0.877 | deleterious | D | 0.853322918 | None | None | N |
Y/D | 0.998 | likely_pathogenic | 0.9969 | pathogenic | -3.857 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | D | 0.852940017 | None | None | N |
Y/E | 0.9995 | likely_pathogenic | 0.9992 | pathogenic | -3.646 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
Y/F | 0.2865 | likely_benign | 0.2744 | benign | -1.384 | Destabilizing | 0.999 | D | 0.63 | neutral | D | 0.65567746 | None | None | N |
Y/G | 0.9942 | likely_pathogenic | 0.9912 | pathogenic | -3.959 | Highly Destabilizing | 1.0 | D | 0.929 | deleterious | None | None | None | None | N |
Y/H | 0.9883 | likely_pathogenic | 0.9846 | pathogenic | -2.529 | Highly Destabilizing | 1.0 | D | 0.818 | deleterious | D | 0.853488097 | None | None | N |
Y/I | 0.9886 | likely_pathogenic | 0.9852 | pathogenic | -2.186 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
Y/K | 0.9993 | likely_pathogenic | 0.9989 | pathogenic | -2.481 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
Y/L | 0.9728 | likely_pathogenic | 0.9661 | pathogenic | -2.186 | Highly Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
Y/M | 0.9912 | likely_pathogenic | 0.9882 | pathogenic | -1.873 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Y/N | 0.9846 | likely_pathogenic | 0.9795 | pathogenic | -3.262 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | D | 0.853322918 | None | None | N |
Y/P | 0.9996 | likely_pathogenic | 0.9995 | pathogenic | -2.662 | Highly Destabilizing | 1.0 | D | 0.943 | deleterious | None | None | None | None | N |
Y/Q | 0.9992 | likely_pathogenic | 0.9987 | pathogenic | -3.02 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
Y/R | 0.9967 | likely_pathogenic | 0.9956 | pathogenic | -2.196 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
Y/S | 0.994 | likely_pathogenic | 0.9916 | pathogenic | -3.588 | Highly Destabilizing | 1.0 | D | 0.906 | deleterious | D | 0.853322918 | None | None | N |
Y/T | 0.9981 | likely_pathogenic | 0.9974 | pathogenic | -3.263 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
Y/V | 0.9798 | likely_pathogenic | 0.9742 | pathogenic | -2.662 | Highly Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
Y/W | 0.8703 | likely_pathogenic | 0.8359 | pathogenic | -0.608 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.