Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16196 | 48811;48812;48813 | chr2:178615359;178615358;178615357 | chr2:179480086;179480085;179480084 |
N2AB | 14555 | 43888;43889;43890 | chr2:178615359;178615358;178615357 | chr2:179480086;179480085;179480084 |
N2A | 13628 | 41107;41108;41109 | chr2:178615359;178615358;178615357 | chr2:179480086;179480085;179480084 |
N2B | 7131 | 21616;21617;21618 | chr2:178615359;178615358;178615357 | chr2:179480086;179480085;179480084 |
Novex-1 | 7256 | 21991;21992;21993 | chr2:178615359;178615358;178615357 | chr2:179480086;179480085;179480084 |
Novex-2 | 7323 | 22192;22193;22194 | chr2:178615359;178615358;178615357 | chr2:179480086;179480085;179480084 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1485291993 | None | 0.001 | N | 0.292 | 0.266 | 0.441740949975 | gnomAD-4.0.0 | 2.73891E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.6E-06 | 0 | 0 |
P/S | None | None | 0.183 | N | 0.356 | 0.257 | 0.17258766438 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0746 | likely_benign | 0.0696 | benign | -1.428 | Destabilizing | 0.183 | N | 0.385 | neutral | N | 0.400816944 | None | None | N |
P/C | 0.4626 | ambiguous | 0.4082 | ambiguous | -1.049 | Destabilizing | 0.983 | D | 0.435 | neutral | None | None | None | None | N |
P/D | 0.434 | ambiguous | 0.4227 | ambiguous | -0.852 | Destabilizing | 0.418 | N | 0.369 | neutral | None | None | None | None | N |
P/E | 0.179 | likely_benign | 0.1782 | benign | -0.848 | Destabilizing | 0.129 | N | 0.401 | neutral | None | None | None | None | N |
P/F | 0.4013 | ambiguous | 0.3654 | ambiguous | -1.116 | Destabilizing | 0.557 | D | 0.449 | neutral | None | None | None | None | N |
P/G | 0.3076 | likely_benign | 0.2797 | benign | -1.751 | Destabilizing | 0.418 | N | 0.385 | neutral | None | None | None | None | N |
P/H | 0.2295 | likely_benign | 0.1955 | benign | -1.25 | Destabilizing | 0.836 | D | 0.429 | neutral | None | None | None | None | N |
P/I | 0.1965 | likely_benign | 0.1826 | benign | -0.647 | Destabilizing | 0.264 | N | 0.431 | neutral | None | None | None | None | N |
P/K | 0.285 | likely_benign | 0.2576 | benign | -1.043 | Destabilizing | 0.004 | N | 0.165 | neutral | None | None | None | None | N |
P/L | 0.0918 | likely_benign | 0.0847 | benign | -0.647 | Destabilizing | 0.001 | N | 0.292 | neutral | N | 0.459318289 | None | None | N |
P/M | 0.2081 | likely_benign | 0.2003 | benign | -0.558 | Destabilizing | 0.716 | D | 0.431 | neutral | None | None | None | None | N |
P/N | 0.3319 | likely_benign | 0.3175 | benign | -0.829 | Destabilizing | 0.418 | N | 0.387 | neutral | None | None | None | None | N |
P/Q | 0.1156 | likely_benign | 0.1051 | benign | -0.976 | Destabilizing | 0.001 | N | 0.167 | neutral | N | 0.346308768 | None | None | N |
P/R | 0.216 | likely_benign | 0.1813 | benign | -0.589 | Destabilizing | 0.213 | N | 0.383 | neutral | N | 0.424371621 | None | None | N |
P/S | 0.1264 | likely_benign | 0.113 | benign | -1.44 | Destabilizing | 0.183 | N | 0.356 | neutral | N | 0.436682424 | None | None | N |
P/T | 0.1099 | likely_benign | 0.0983 | benign | -1.314 | Destabilizing | 0.351 | N | 0.373 | neutral | N | 0.43246776 | None | None | N |
P/V | 0.139 | likely_benign | 0.1342 | benign | -0.871 | Destabilizing | 0.129 | N | 0.388 | neutral | None | None | None | None | N |
P/W | 0.6363 | likely_pathogenic | 0.582 | pathogenic | -1.261 | Destabilizing | 0.983 | D | 0.456 | neutral | None | None | None | None | N |
P/Y | 0.4501 | ambiguous | 0.4148 | ambiguous | -0.964 | Destabilizing | 0.836 | D | 0.454 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.