Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16198 | 48817;48818;48819 | chr2:178615353;178615352;178615351 | chr2:179480080;179480079;179480078 |
N2AB | 14557 | 43894;43895;43896 | chr2:178615353;178615352;178615351 | chr2:179480080;179480079;179480078 |
N2A | 13630 | 41113;41114;41115 | chr2:178615353;178615352;178615351 | chr2:179480080;179480079;179480078 |
N2B | 7133 | 21622;21623;21624 | chr2:178615353;178615352;178615351 | chr2:179480080;179480079;179480078 |
Novex-1 | 7258 | 21997;21998;21999 | chr2:178615353;178615352;178615351 | chr2:179480080;179480079;179480078 |
Novex-2 | 7325 | 22198;22199;22200 | chr2:178615353;178615352;178615351 | chr2:179480080;179480079;179480078 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | None | None | 1.0 | N | 0.545 | 0.39 | 0.304435445954 | gnomAD-4.0.0 | 1.36946E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80002E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4144 | ambiguous | 0.3572 | ambiguous | -0.301 | Destabilizing | 1.0 | D | 0.545 | neutral | N | 0.520877807 | None | None | N |
G/C | 0.5892 | likely_pathogenic | 0.5062 | ambiguous | -0.949 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | D | 0.682378772 | None | None | N |
G/D | 0.3083 | likely_benign | 0.2622 | benign | -0.703 | Destabilizing | 1.0 | D | 0.568 | neutral | D | 0.53047557 | None | None | N |
G/E | 0.4834 | ambiguous | 0.4262 | ambiguous | -0.859 | Destabilizing | 1.0 | D | 0.628 | neutral | None | None | None | None | N |
G/F | 0.8502 | likely_pathogenic | 0.813 | pathogenic | -1.083 | Destabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | N |
G/H | 0.7067 | likely_pathogenic | 0.6347 | pathogenic | -0.382 | Destabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | N |
G/I | 0.7585 | likely_pathogenic | 0.6724 | pathogenic | -0.564 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | N |
G/K | 0.8298 | likely_pathogenic | 0.7628 | pathogenic | -0.729 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
G/L | 0.7742 | likely_pathogenic | 0.727 | pathogenic | -0.564 | Destabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
G/M | 0.81 | likely_pathogenic | 0.765 | pathogenic | -0.704 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
G/N | 0.3831 | ambiguous | 0.3453 | ambiguous | -0.39 | Destabilizing | 1.0 | D | 0.592 | neutral | None | None | None | None | N |
G/P | 0.9525 | likely_pathogenic | 0.9293 | pathogenic | -0.453 | Destabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | N |
G/Q | 0.6725 | likely_pathogenic | 0.607 | pathogenic | -0.662 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
G/R | 0.7778 | likely_pathogenic | 0.6998 | pathogenic | -0.301 | Destabilizing | 1.0 | D | 0.618 | neutral | D | 0.533288027 | None | None | N |
G/S | 0.2441 | likely_benign | 0.2072 | benign | -0.52 | Destabilizing | 1.0 | D | 0.615 | neutral | N | 0.468359606 | None | None | N |
G/T | 0.4663 | ambiguous | 0.3957 | ambiguous | -0.618 | Destabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | N |
G/V | 0.6507 | likely_pathogenic | 0.5541 | ambiguous | -0.453 | Destabilizing | 1.0 | D | 0.663 | neutral | D | 0.59865995 | None | None | N |
G/W | 0.7737 | likely_pathogenic | 0.6977 | pathogenic | -1.174 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
G/Y | 0.7309 | likely_pathogenic | 0.6696 | pathogenic | -0.878 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.