Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16207 | 48844;48845;48846 | chr2:178615326;178615325;178615324 | chr2:179480053;179480052;179480051 |
N2AB | 14566 | 43921;43922;43923 | chr2:178615326;178615325;178615324 | chr2:179480053;179480052;179480051 |
N2A | 13639 | 41140;41141;41142 | chr2:178615326;178615325;178615324 | chr2:179480053;179480052;179480051 |
N2B | 7142 | 21649;21650;21651 | chr2:178615326;178615325;178615324 | chr2:179480053;179480052;179480051 |
Novex-1 | 7267 | 22024;22025;22026 | chr2:178615326;178615325;178615324 | chr2:179480053;179480052;179480051 |
Novex-2 | 7334 | 22225;22226;22227 | chr2:178615326;178615325;178615324 | chr2:179480053;179480052;179480051 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1372711773 | 0.388 | 0.722 | N | 0.511 | 0.195 | 0.306377322295 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
E/Q | rs1372711773 | 0.388 | 0.722 | N | 0.511 | 0.195 | 0.306377322295 | gnomAD-4.0.0 | 3.18884E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78319E-05 | None | 0 | 0 | 0 | 0 | 3.03196E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1275 | likely_benign | 0.1405 | benign | -0.011 | Destabilizing | 0.722 | D | 0.552 | neutral | N | 0.472733887 | None | None | N |
E/C | 0.7706 | likely_pathogenic | 0.7732 | pathogenic | -0.445 | Destabilizing | 0.996 | D | 0.758 | deleterious | None | None | None | None | N |
E/D | 0.0603 | likely_benign | 0.0634 | benign | -0.517 | Destabilizing | 0.001 | N | 0.145 | neutral | N | 0.437041958 | None | None | N |
E/F | 0.6142 | likely_pathogenic | 0.6334 | pathogenic | -0.117 | Destabilizing | 0.987 | D | 0.678 | prob.neutral | None | None | None | None | N |
E/G | 0.1499 | likely_benign | 0.1528 | benign | -0.086 | Destabilizing | 0.722 | D | 0.542 | neutral | N | 0.476632558 | None | None | N |
E/H | 0.3935 | ambiguous | 0.3989 | ambiguous | 0.609 | Stabilizing | 0.987 | D | 0.531 | neutral | None | None | None | None | N |
E/I | 0.2559 | likely_benign | 0.2809 | benign | 0.126 | Stabilizing | 0.961 | D | 0.665 | neutral | None | None | None | None | N |
E/K | 0.1288 | likely_benign | 0.1306 | benign | 0.187 | Stabilizing | 0.722 | D | 0.516 | neutral | N | 0.472535976 | None | None | N |
E/L | 0.277 | likely_benign | 0.3027 | benign | 0.126 | Stabilizing | 0.961 | D | 0.632 | neutral | None | None | None | None | N |
E/M | 0.3536 | ambiguous | 0.3785 | ambiguous | -0.201 | Destabilizing | 0.996 | D | 0.661 | neutral | None | None | None | None | N |
E/N | 0.1318 | likely_benign | 0.1495 | benign | -0.004 | Destabilizing | 0.633 | D | 0.515 | neutral | None | None | None | None | N |
E/P | 0.2357 | likely_benign | 0.2397 | benign | 0.096 | Stabilizing | 0.961 | D | 0.57 | neutral | None | None | None | None | N |
E/Q | 0.1367 | likely_benign | 0.1374 | benign | -0.017 | Destabilizing | 0.722 | D | 0.511 | neutral | N | 0.481574543 | None | None | N |
E/R | 0.2809 | likely_benign | 0.2689 | benign | 0.451 | Stabilizing | 0.961 | D | 0.527 | neutral | None | None | None | None | N |
E/S | 0.1265 | likely_benign | 0.1394 | benign | -0.14 | Destabilizing | 0.775 | D | 0.51 | neutral | None | None | None | None | N |
E/T | 0.1543 | likely_benign | 0.1694 | benign | -0.068 | Destabilizing | 0.775 | D | 0.555 | neutral | None | None | None | None | N |
E/V | 0.1659 | likely_benign | 0.1853 | benign | 0.096 | Stabilizing | 0.949 | D | 0.557 | neutral | N | 0.460445931 | None | None | N |
E/W | 0.874 | likely_pathogenic | 0.8643 | pathogenic | -0.108 | Destabilizing | 0.996 | D | 0.768 | deleterious | None | None | None | None | N |
E/Y | 0.4856 | ambiguous | 0.4937 | ambiguous | 0.087 | Stabilizing | 0.987 | D | 0.664 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.