Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16208 | 48847;48848;48849 | chr2:178615323;178615322;178615321 | chr2:179480050;179480049;179480048 |
N2AB | 14567 | 43924;43925;43926 | chr2:178615323;178615322;178615321 | chr2:179480050;179480049;179480048 |
N2A | 13640 | 41143;41144;41145 | chr2:178615323;178615322;178615321 | chr2:179480050;179480049;179480048 |
N2B | 7143 | 21652;21653;21654 | chr2:178615323;178615322;178615321 | chr2:179480050;179480049;179480048 |
Novex-1 | 7268 | 22027;22028;22029 | chr2:178615323;178615322;178615321 | chr2:179480050;179480049;179480048 |
Novex-2 | 7335 | 22228;22229;22230 | chr2:178615323;178615322;178615321 | chr2:179480050;179480049;179480048 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs2057137481 | None | 0.012 | N | 0.365 | 0.27 | 0.547512163748 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs2057137481 | None | 0.012 | N | 0.365 | 0.27 | 0.547512163748 | gnomAD-4.0.0 | 6.58423E-06 | None | None | None | None | N | None | 2.41639E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0683 | likely_benign | 0.0721 | benign | -0.728 | Destabilizing | 0.454 | N | 0.397 | neutral | N | 0.499662396 | None | None | N |
P/C | 0.5194 | ambiguous | 0.5102 | ambiguous | -0.658 | Destabilizing | 0.998 | D | 0.465 | neutral | None | None | None | None | N |
P/D | 0.5857 | likely_pathogenic | 0.5406 | ambiguous | -0.434 | Destabilizing | 0.949 | D | 0.435 | neutral | None | None | None | None | N |
P/E | 0.3638 | ambiguous | 0.3359 | benign | -0.509 | Destabilizing | 0.842 | D | 0.423 | neutral | None | None | None | None | N |
P/F | 0.5538 | ambiguous | 0.5168 | ambiguous | -0.705 | Destabilizing | 0.949 | D | 0.474 | neutral | None | None | None | None | N |
P/G | 0.3577 | ambiguous | 0.3432 | ambiguous | -0.93 | Destabilizing | 0.728 | D | 0.425 | neutral | None | None | None | None | N |
P/H | 0.3094 | likely_benign | 0.2808 | benign | -0.45 | Destabilizing | 0.997 | D | 0.429 | neutral | D | 0.564549855 | None | None | N |
P/I | 0.2485 | likely_benign | 0.2536 | benign | -0.321 | Destabilizing | 0.728 | D | 0.437 | neutral | None | None | None | None | N |
P/K | 0.3942 | ambiguous | 0.3753 | ambiguous | -0.682 | Destabilizing | 0.842 | D | 0.401 | neutral | None | None | None | None | N |
P/L | 0.1283 | likely_benign | 0.1218 | benign | -0.321 | Destabilizing | 0.012 | N | 0.365 | neutral | N | 0.464813159 | None | None | N |
P/M | 0.2456 | likely_benign | 0.2412 | benign | -0.378 | Destabilizing | 0.525 | D | 0.367 | neutral | None | None | None | None | N |
P/N | 0.351 | ambiguous | 0.3418 | ambiguous | -0.389 | Destabilizing | 0.949 | D | 0.467 | neutral | None | None | None | None | N |
P/Q | 0.2186 | likely_benign | 0.2056 | benign | -0.597 | Destabilizing | 0.974 | D | 0.473 | neutral | None | None | None | None | N |
P/R | 0.3027 | likely_benign | 0.2776 | benign | -0.165 | Destabilizing | 0.934 | D | 0.48 | neutral | N | 0.517634538 | None | None | N |
P/S | 0.1579 | likely_benign | 0.1533 | benign | -0.809 | Destabilizing | 0.051 | N | 0.263 | neutral | N | 0.482140995 | None | None | N |
P/T | 0.0994 | likely_benign | 0.0963 | benign | -0.777 | Destabilizing | 0.051 | N | 0.263 | neutral | N | 0.486748361 | None | None | N |
P/V | 0.1542 | likely_benign | 0.1567 | benign | -0.42 | Destabilizing | 0.728 | D | 0.397 | neutral | None | None | None | None | N |
P/W | 0.7591 | likely_pathogenic | 0.7209 | pathogenic | -0.811 | Destabilizing | 0.998 | D | 0.608 | neutral | None | None | None | None | N |
P/Y | 0.4703 | ambiguous | 0.4485 | ambiguous | -0.524 | Destabilizing | 0.991 | D | 0.467 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.