Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16209 | 48850;48851;48852 | chr2:178615320;178615319;178615318 | chr2:179480047;179480046;179480045 |
N2AB | 14568 | 43927;43928;43929 | chr2:178615320;178615319;178615318 | chr2:179480047;179480046;179480045 |
N2A | 13641 | 41146;41147;41148 | chr2:178615320;178615319;178615318 | chr2:179480047;179480046;179480045 |
N2B | 7144 | 21655;21656;21657 | chr2:178615320;178615319;178615318 | chr2:179480047;179480046;179480045 |
Novex-1 | 7269 | 22030;22031;22032 | chr2:178615320;178615319;178615318 | chr2:179480047;179480046;179480045 |
Novex-2 | 7336 | 22231;22232;22233 | chr2:178615320;178615319;178615318 | chr2:179480047;179480046;179480045 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.656 | N | 0.504 | 0.123 | 0.47432691512 | gnomAD-4.0.0 | 1.59457E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.8826E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1798 | likely_benign | 0.1673 | benign | -1.551 | Destabilizing | 0.656 | D | 0.504 | neutral | N | 0.475346037 | None | None | N |
V/C | 0.6889 | likely_pathogenic | 0.6835 | pathogenic | -0.911 | Destabilizing | 0.998 | D | 0.607 | neutral | None | None | None | None | N |
V/D | 0.6515 | likely_pathogenic | 0.6145 | pathogenic | -1.408 | Destabilizing | 0.97 | D | 0.7 | prob.neutral | D | 0.551384499 | None | None | N |
V/E | 0.4773 | ambiguous | 0.4324 | ambiguous | -1.332 | Destabilizing | 0.978 | D | 0.621 | neutral | None | None | None | None | N |
V/F | 0.2696 | likely_benign | 0.2501 | benign | -1.013 | Destabilizing | 0.942 | D | 0.625 | neutral | D | 0.548073778 | None | None | N |
V/G | 0.2841 | likely_benign | 0.2648 | benign | -1.951 | Destabilizing | 0.97 | D | 0.639 | neutral | N | 0.466609496 | None | None | N |
V/H | 0.6289 | likely_pathogenic | 0.6016 | pathogenic | -1.554 | Destabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/I | 0.0922 | likely_benign | 0.0893 | benign | -0.517 | Destabilizing | 0.014 | N | 0.271 | neutral | N | 0.471760314 | None | None | N |
V/K | 0.3714 | ambiguous | 0.3542 | ambiguous | -1.247 | Destabilizing | 0.978 | D | 0.609 | neutral | None | None | None | None | N |
V/L | 0.2048 | likely_benign | 0.1837 | benign | -0.517 | Destabilizing | 0.247 | N | 0.355 | neutral | N | 0.476207523 | None | None | N |
V/M | 0.1624 | likely_benign | 0.1467 | benign | -0.38 | Destabilizing | 0.356 | N | 0.233 | neutral | None | None | None | None | N |
V/N | 0.4224 | ambiguous | 0.4071 | ambiguous | -1.151 | Destabilizing | 0.978 | D | 0.718 | prob.delet. | None | None | None | None | N |
V/P | 0.8314 | likely_pathogenic | 0.792 | pathogenic | -0.828 | Destabilizing | 0.993 | D | 0.664 | neutral | None | None | None | None | N |
V/Q | 0.3505 | ambiguous | 0.3264 | benign | -1.202 | Destabilizing | 0.978 | D | 0.674 | neutral | None | None | None | None | N |
V/R | 0.3714 | ambiguous | 0.3438 | ambiguous | -0.872 | Destabilizing | 0.978 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/S | 0.2606 | likely_benign | 0.249 | benign | -1.732 | Destabilizing | 0.754 | D | 0.591 | neutral | None | None | None | None | N |
V/T | 0.1628 | likely_benign | 0.1547 | benign | -1.533 | Destabilizing | 0.076 | N | 0.266 | neutral | None | None | None | None | N |
V/W | 0.9067 | likely_pathogenic | 0.884 | pathogenic | -1.331 | Destabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | N |
V/Y | 0.7144 | likely_pathogenic | 0.6932 | pathogenic | -0.981 | Destabilizing | 0.978 | D | 0.647 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.