Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16212 | 48859;48860;48861 | chr2:178615311;178615310;178615309 | chr2:179480038;179480037;179480036 |
N2AB | 14571 | 43936;43937;43938 | chr2:178615311;178615310;178615309 | chr2:179480038;179480037;179480036 |
N2A | 13644 | 41155;41156;41157 | chr2:178615311;178615310;178615309 | chr2:179480038;179480037;179480036 |
N2B | 7147 | 21664;21665;21666 | chr2:178615311;178615310;178615309 | chr2:179480038;179480037;179480036 |
Novex-1 | 7272 | 22039;22040;22041 | chr2:178615311;178615310;178615309 | chr2:179480038;179480037;179480036 |
Novex-2 | 7339 | 22240;22241;22242 | chr2:178615311;178615310;178615309 | chr2:179480038;179480037;179480036 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.565 | D | 0.525 | 0.294 | 0.402043589563 | gnomAD-4.0.0 | 1.59506E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03324E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1096 | likely_benign | 0.0968 | benign | -0.77 | Destabilizing | 0.349 | N | 0.468 | neutral | D | 0.573341689 | None | None | N |
T/C | 0.2944 | likely_benign | 0.2919 | benign | -0.405 | Destabilizing | 0.996 | D | 0.675 | prob.neutral | None | None | None | None | N |
T/D | 0.6595 | likely_pathogenic | 0.6074 | pathogenic | -0.881 | Destabilizing | 0.923 | D | 0.615 | neutral | None | None | None | None | N |
T/E | 0.4395 | ambiguous | 0.3761 | ambiguous | -0.71 | Destabilizing | 0.923 | D | 0.605 | neutral | None | None | None | None | N |
T/F | 0.5132 | ambiguous | 0.4561 | ambiguous | -0.551 | Destabilizing | 0.923 | D | 0.695 | prob.neutral | None | None | None | None | N |
T/G | 0.2601 | likely_benign | 0.2215 | benign | -1.163 | Destabilizing | 0.923 | D | 0.615 | neutral | None | None | None | None | N |
T/H | 0.4528 | ambiguous | 0.4102 | ambiguous | -1.282 | Destabilizing | 0.996 | D | 0.693 | prob.neutral | None | None | None | None | N |
T/I | 0.291 | likely_benign | 0.253 | benign | 0.248 | Stabilizing | 0.565 | D | 0.525 | neutral | D | 0.611481548 | None | None | N |
T/K | 0.232 | likely_benign | 0.2148 | benign | -0.341 | Destabilizing | 0.901 | D | 0.595 | neutral | D | 0.532858394 | None | None | N |
T/L | 0.0685 | likely_benign | 0.0604 | benign | 0.248 | Stabilizing | 0.005 | N | 0.316 | neutral | None | None | None | None | N |
T/M | 0.0712 | likely_benign | 0.0654 | benign | 0.156 | Stabilizing | 0.923 | D | 0.682 | prob.neutral | None | None | None | None | N |
T/N | 0.1346 | likely_benign | 0.1174 | benign | -0.915 | Destabilizing | 0.961 | D | 0.545 | neutral | None | None | None | None | N |
T/P | 0.0916 | likely_benign | 0.0772 | benign | -0.059 | Destabilizing | 0.008 | N | 0.397 | neutral | N | 0.482750597 | None | None | N |
T/Q | 0.2363 | likely_benign | 0.211 | benign | -0.705 | Destabilizing | 0.961 | D | 0.678 | prob.neutral | None | None | None | None | N |
T/R | 0.2189 | likely_benign | 0.1944 | benign | -0.499 | Destabilizing | 0.949 | D | 0.667 | neutral | D | 0.538543144 | None | None | N |
T/S | 0.1928 | likely_benign | 0.168 | benign | -1.15 | Destabilizing | 0.722 | D | 0.43 | neutral | N | 0.516846315 | None | None | N |
T/V | 0.1786 | likely_benign | 0.1625 | benign | -0.059 | Destabilizing | 0.633 | D | 0.443 | neutral | None | None | None | None | N |
T/W | 0.8133 | likely_pathogenic | 0.7618 | pathogenic | -0.751 | Destabilizing | 0.996 | D | 0.69 | prob.neutral | None | None | None | None | N |
T/Y | 0.5032 | ambiguous | 0.4437 | ambiguous | -0.332 | Destabilizing | 0.987 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.