Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16216 | 48871;48872;48873 | chr2:178614961;178614960;178614959 | chr2:179479688;179479687;179479686 |
N2AB | 14575 | 43948;43949;43950 | chr2:178614961;178614960;178614959 | chr2:179479688;179479687;179479686 |
N2A | 13648 | 41167;41168;41169 | chr2:178614961;178614960;178614959 | chr2:179479688;179479687;179479686 |
N2B | 7151 | 21676;21677;21678 | chr2:178614961;178614960;178614959 | chr2:179479688;179479687;179479686 |
Novex-1 | 7276 | 22051;22052;22053 | chr2:178614961;178614960;178614959 | chr2:179479688;179479687;179479686 |
Novex-2 | 7343 | 22252;22253;22254 | chr2:178614961;178614960;178614959 | chr2:179479688;179479687;179479686 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.998 | D | 0.638 | 0.5 | 0.552005039658 | gnomAD-4.0.0 | 1.6308E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.925E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6632 | likely_pathogenic | 0.6935 | pathogenic | -2.138 | Highly Destabilizing | 0.998 | D | 0.638 | neutral | D | 0.581343766 | None | None | N |
V/C | 0.9184 | likely_pathogenic | 0.9291 | pathogenic | -1.75 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/D | 0.9667 | likely_pathogenic | 0.9678 | pathogenic | -2.462 | Highly Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
V/E | 0.9212 | likely_pathogenic | 0.9277 | pathogenic | -2.241 | Highly Destabilizing | 1.0 | D | 0.803 | deleterious | D | 0.720621124 | None | None | N |
V/F | 0.6968 | likely_pathogenic | 0.725 | pathogenic | -1.29 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
V/G | 0.8367 | likely_pathogenic | 0.8423 | pathogenic | -2.695 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | D | 0.775329474 | None | None | N |
V/H | 0.9826 | likely_pathogenic | 0.9849 | pathogenic | -2.335 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/I | 0.1101 | likely_benign | 0.1122 | benign | -0.588 | Destabilizing | 0.813 | D | 0.263 | neutral | None | None | None | None | N |
V/K | 0.9622 | likely_pathogenic | 0.9623 | pathogenic | -1.864 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
V/L | 0.6204 | likely_pathogenic | 0.6701 | pathogenic | -0.588 | Destabilizing | 0.981 | D | 0.628 | neutral | N | 0.516716889 | None | None | N |
V/M | 0.5549 | ambiguous | 0.6002 | pathogenic | -0.627 | Destabilizing | 0.999 | D | 0.768 | deleterious | D | 0.64274311 | None | None | N |
V/N | 0.9308 | likely_pathogenic | 0.9386 | pathogenic | -2.147 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
V/P | 0.9868 | likely_pathogenic | 0.9838 | pathogenic | -1.076 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
V/Q | 0.9432 | likely_pathogenic | 0.9506 | pathogenic | -1.986 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/R | 0.9572 | likely_pathogenic | 0.9576 | pathogenic | -1.684 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
V/S | 0.8955 | likely_pathogenic | 0.9083 | pathogenic | -2.83 | Highly Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
V/T | 0.8044 | likely_pathogenic | 0.8203 | pathogenic | -2.446 | Highly Destabilizing | 0.998 | D | 0.681 | prob.neutral | None | None | None | None | N |
V/W | 0.993 | likely_pathogenic | 0.9937 | pathogenic | -1.729 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
V/Y | 0.9477 | likely_pathogenic | 0.9545 | pathogenic | -1.361 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.