Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16221 | 48886;48887;48888 | chr2:178614946;178614945;178614944 | chr2:179479673;179479672;179479671 |
N2AB | 14580 | 43963;43964;43965 | chr2:178614946;178614945;178614944 | chr2:179479673;179479672;179479671 |
N2A | 13653 | 41182;41183;41184 | chr2:178614946;178614945;178614944 | chr2:179479673;179479672;179479671 |
N2B | 7156 | 21691;21692;21693 | chr2:178614946;178614945;178614944 | chr2:179479673;179479672;179479671 |
Novex-1 | 7281 | 22066;22067;22068 | chr2:178614946;178614945;178614944 | chr2:179479673;179479672;179479671 |
Novex-2 | 7348 | 22267;22268;22269 | chr2:178614946;178614945;178614944 | chr2:179479673;179479672;179479671 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs2057034517 | None | 0.994 | D | 0.536 | 0.263 | 0.322786055943 | gnomAD-4.0.0 | 1.6324E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.92767E-06 | 0 | 0 |
E/K | None | None | 0.994 | N | 0.615 | 0.314 | 0.491455083755 | gnomAD-4.0.0 | 1.38346E-06 | None | None | None | None | N | None | 6.01685E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1251 | likely_benign | 0.1441 | benign | -0.418 | Destabilizing | 0.989 | D | 0.487 | neutral | N | 0.477746392 | None | None | N |
E/C | 0.9128 | likely_pathogenic | 0.9325 | pathogenic | 0.031 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/D | 0.2971 | likely_benign | 0.362 | ambiguous | -0.396 | Destabilizing | 0.994 | D | 0.536 | neutral | D | 0.554596106 | None | None | N |
E/F | 0.9061 | likely_pathogenic | 0.9385 | pathogenic | -0.36 | Destabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | N |
E/G | 0.3217 | likely_benign | 0.375 | ambiguous | -0.615 | Destabilizing | 0.217 | N | 0.303 | neutral | D | 0.61218926 | None | None | N |
E/H | 0.6749 | likely_pathogenic | 0.7585 | pathogenic | -0.2 | Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | N |
E/I | 0.4376 | ambiguous | 0.5016 | ambiguous | 0.068 | Stabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
E/K | 0.1589 | likely_benign | 0.1851 | benign | 0.336 | Stabilizing | 0.994 | D | 0.615 | neutral | N | 0.50399125 | None | None | N |
E/L | 0.5635 | ambiguous | 0.6309 | pathogenic | 0.068 | Stabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
E/M | 0.5532 | ambiguous | 0.6093 | pathogenic | 0.237 | Stabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
E/N | 0.3801 | ambiguous | 0.463 | ambiguous | 0.031 | Stabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
E/P | 0.3388 | likely_benign | 0.3628 | ambiguous | -0.074 | Destabilizing | 1.0 | D | 0.571 | neutral | None | None | None | None | N |
E/Q | 0.1679 | likely_benign | 0.1912 | benign | 0.054 | Stabilizing | 0.999 | D | 0.679 | prob.neutral | N | 0.506494362 | None | None | N |
E/R | 0.3106 | likely_benign | 0.3515 | ambiguous | 0.491 | Stabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
E/S | 0.2727 | likely_benign | 0.3366 | benign | -0.126 | Destabilizing | 0.992 | D | 0.6 | neutral | None | None | None | None | N |
E/T | 0.2615 | likely_benign | 0.3197 | benign | 0.034 | Stabilizing | 0.999 | D | 0.567 | neutral | None | None | None | None | N |
E/V | 0.2366 | likely_benign | 0.28 | benign | -0.074 | Destabilizing | 0.999 | D | 0.608 | neutral | D | 0.558442736 | None | None | N |
E/W | 0.9768 | likely_pathogenic | 0.9834 | pathogenic | -0.22 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/Y | 0.8423 | likely_pathogenic | 0.8881 | pathogenic | -0.117 | Destabilizing | 1.0 | D | 0.624 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.