Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16235 | 48928;48929;48930 | chr2:178614904;178614903;178614902 | chr2:179479631;179479630;179479629 |
N2AB | 14594 | 44005;44006;44007 | chr2:178614904;178614903;178614902 | chr2:179479631;179479630;179479629 |
N2A | 13667 | 41224;41225;41226 | chr2:178614904;178614903;178614902 | chr2:179479631;179479630;179479629 |
N2B | 7170 | 21733;21734;21735 | chr2:178614904;178614903;178614902 | chr2:179479631;179479630;179479629 |
Novex-1 | 7295 | 22108;22109;22110 | chr2:178614904;178614903;178614902 | chr2:179479631;179479630;179479629 |
Novex-2 | 7362 | 22309;22310;22311 | chr2:178614904;178614903;178614902 | chr2:179479631;179479630;179479629 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/L | None | None | None | N | 0.199 | 0.184 | 0.0716867268079 | gnomAD-4.0.0 | 3.32415E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.96584E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.159 | likely_benign | 0.1623 | benign | -0.149 | Destabilizing | 0.004 | N | 0.277 | neutral | None | None | None | None | I |
Q/C | 0.3725 | ambiguous | 0.3599 | ambiguous | 0.065 | Stabilizing | 0.497 | N | 0.511 | neutral | None | None | None | None | I |
Q/D | 0.5938 | likely_pathogenic | 0.5912 | pathogenic | -0.071 | Destabilizing | 0.044 | N | 0.323 | neutral | None | None | None | None | I |
Q/E | 0.1384 | likely_benign | 0.1324 | benign | -0.12 | Destabilizing | 0.014 | N | 0.258 | neutral | N | 0.430053512 | None | None | I |
Q/F | 0.3937 | ambiguous | 0.3781 | ambiguous | -0.464 | Destabilizing | 0.022 | N | 0.533 | neutral | None | None | None | None | I |
Q/G | 0.3313 | likely_benign | 0.3352 | benign | -0.291 | Destabilizing | 0.018 | N | 0.482 | neutral | None | None | None | None | I |
Q/H | 0.1821 | likely_benign | 0.1903 | benign | -0.127 | Destabilizing | None | N | 0.141 | neutral | N | 0.449835862 | None | None | I |
Q/I | 0.1999 | likely_benign | 0.1918 | benign | 0.13 | Stabilizing | None | N | 0.227 | neutral | None | None | None | None | I |
Q/K | 0.1467 | likely_benign | 0.1467 | benign | 0.056 | Stabilizing | 0.014 | N | 0.281 | neutral | N | 0.431184991 | None | None | I |
Q/L | 0.0596 | likely_benign | 0.0636 | benign | 0.13 | Stabilizing | None | N | 0.199 | neutral | N | 0.373717017 | None | None | I |
Q/M | 0.1601 | likely_benign | 0.1815 | benign | 0.259 | Stabilizing | None | N | 0.119 | neutral | None | None | None | None | I |
Q/N | 0.3143 | likely_benign | 0.3096 | benign | -0.221 | Destabilizing | 0.044 | N | 0.333 | neutral | None | None | None | None | I |
Q/P | 0.5728 | likely_pathogenic | 0.5173 | ambiguous | 0.063 | Stabilizing | 0.175 | N | 0.485 | neutral | N | 0.478860319 | None | None | I |
Q/R | 0.1552 | likely_benign | 0.144 | benign | 0.257 | Stabilizing | 0.014 | N | 0.347 | neutral | N | 0.435730849 | None | None | I |
Q/S | 0.245 | likely_benign | 0.2469 | benign | -0.205 | Destabilizing | 0.018 | N | 0.269 | neutral | None | None | None | None | I |
Q/T | 0.2293 | likely_benign | 0.223 | benign | -0.116 | Destabilizing | 0.018 | N | 0.407 | neutral | None | None | None | None | I |
Q/V | 0.1261 | likely_benign | 0.1304 | benign | 0.063 | Stabilizing | 0.001 | N | 0.363 | neutral | None | None | None | None | I |
Q/W | 0.4719 | ambiguous | 0.4489 | ambiguous | -0.487 | Destabilizing | 0.788 | D | 0.504 | neutral | None | None | None | None | I |
Q/Y | 0.314 | likely_benign | 0.2962 | benign | -0.214 | Destabilizing | 0.022 | N | 0.507 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.