Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16237 | 48934;48935;48936 | chr2:178614898;178614897;178614896 | chr2:179479625;179479624;179479623 |
N2AB | 14596 | 44011;44012;44013 | chr2:178614898;178614897;178614896 | chr2:179479625;179479624;179479623 |
N2A | 13669 | 41230;41231;41232 | chr2:178614898;178614897;178614896 | chr2:179479625;179479624;179479623 |
N2B | 7172 | 21739;21740;21741 | chr2:178614898;178614897;178614896 | chr2:179479625;179479624;179479623 |
Novex-1 | 7297 | 22114;22115;22116 | chr2:178614898;178614897;178614896 | chr2:179479625;179479624;179479623 |
Novex-2 | 7364 | 22315;22316;22317 | chr2:178614898;178614897;178614896 | chr2:179479625;179479624;179479623 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.505 | N | 0.669 | 0.099 | 0.215109475489 | gnomAD-4.0.0 | 1.67126E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.99846E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4552 | ambiguous | 0.4238 | ambiguous | -0.999 | Destabilizing | 0.991 | D | 0.708 | prob.delet. | None | None | None | None | N |
A/D | 0.4871 | ambiguous | 0.469 | ambiguous | -1.286 | Destabilizing | 0.782 | D | 0.812 | deleterious | N | 0.471125113 | None | None | N |
A/E | 0.3162 | likely_benign | 0.3006 | benign | -1.372 | Destabilizing | 0.826 | D | 0.705 | prob.neutral | None | None | None | None | N |
A/F | 0.3015 | likely_benign | 0.2987 | benign | -1.251 | Destabilizing | 0.826 | D | 0.81 | deleterious | None | None | None | None | N |
A/G | 0.1973 | likely_benign | 0.184 | benign | -1.196 | Destabilizing | 0.505 | D | 0.647 | neutral | N | 0.490165466 | None | None | N |
A/H | 0.5163 | ambiguous | 0.5114 | ambiguous | -1.203 | Destabilizing | 0.991 | D | 0.807 | deleterious | None | None | None | None | N |
A/I | 0.1869 | likely_benign | 0.1961 | benign | -0.665 | Destabilizing | 0.404 | N | 0.671 | neutral | None | None | None | None | N |
A/K | 0.5958 | likely_pathogenic | 0.5614 | ambiguous | -1.277 | Destabilizing | 0.826 | D | 0.706 | prob.neutral | None | None | None | None | N |
A/L | 0.1558 | likely_benign | 0.1582 | benign | -0.665 | Destabilizing | 0.004 | N | 0.403 | neutral | None | None | None | None | N |
A/M | 0.2157 | likely_benign | 0.2275 | benign | -0.476 | Destabilizing | 0.826 | D | 0.751 | deleterious | None | None | None | None | N |
A/N | 0.299 | likely_benign | 0.3253 | benign | -0.94 | Destabilizing | 0.906 | D | 0.812 | deleterious | None | None | None | None | N |
A/P | 0.0952 | likely_benign | 0.0921 | benign | -0.741 | Destabilizing | 0.007 | N | 0.381 | neutral | N | 0.453364097 | None | None | N |
A/Q | 0.3386 | likely_benign | 0.3356 | benign | -1.212 | Destabilizing | 0.906 | D | 0.747 | deleterious | None | None | None | None | N |
A/R | 0.565 | likely_pathogenic | 0.5156 | ambiguous | -0.767 | Destabilizing | 0.906 | D | 0.745 | deleterious | None | None | None | None | N |
A/S | 0.1073 | likely_benign | 0.1111 | benign | -1.245 | Destabilizing | 0.505 | D | 0.669 | neutral | N | 0.470935537 | None | None | N |
A/T | 0.1139 | likely_benign | 0.1197 | benign | -1.251 | Destabilizing | 0.505 | D | 0.664 | neutral | N | 0.46196181 | None | None | N |
A/V | 0.1145 | likely_benign | 0.1215 | benign | -0.741 | Destabilizing | 0.003 | N | 0.347 | neutral | N | 0.418968234 | None | None | N |
A/W | 0.753 | likely_pathogenic | 0.7188 | pathogenic | -1.456 | Destabilizing | 0.991 | D | 0.795 | deleterious | None | None | None | None | N |
A/Y | 0.4666 | ambiguous | 0.4512 | ambiguous | -1.126 | Destabilizing | 0.967 | D | 0.812 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.