Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16241 | 48946;48947;48948 | chr2:178614886;178614885;178614884 | chr2:179479613;179479612;179479611 |
N2AB | 14600 | 44023;44024;44025 | chr2:178614886;178614885;178614884 | chr2:179479613;179479612;179479611 |
N2A | 13673 | 41242;41243;41244 | chr2:178614886;178614885;178614884 | chr2:179479613;179479612;179479611 |
N2B | 7176 | 21751;21752;21753 | chr2:178614886;178614885;178614884 | chr2:179479613;179479612;179479611 |
Novex-1 | 7301 | 22126;22127;22128 | chr2:178614886;178614885;178614884 | chr2:179479613;179479612;179479611 |
Novex-2 | 7368 | 22327;22328;22329 | chr2:178614886;178614885;178614884 | chr2:179479613;179479612;179479611 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.211 | D | 0.783 | 0.406 | 0.315314060047 | gnomAD-4.0.0 | 2.1041E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.7463E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.3361 | likely_benign | 0.2411 | benign | -0.591 | Destabilizing | 0.016 | N | 0.611 | neutral | None | None | None | None | N |
S/C | 0.2509 | likely_benign | 0.1817 | benign | -0.552 | Destabilizing | None | N | 0.599 | neutral | D | 0.75120934 | None | None | N |
S/D | 0.9798 | likely_pathogenic | 0.9698 | pathogenic | -1.078 | Destabilizing | 0.519 | D | 0.787 | deleterious | None | None | None | None | N |
S/E | 0.9916 | likely_pathogenic | 0.9875 | pathogenic | -0.985 | Destabilizing | 0.519 | D | 0.793 | deleterious | None | None | None | None | N |
S/F | 0.9824 | likely_pathogenic | 0.954 | pathogenic | -0.296 | Destabilizing | 0.555 | D | 0.836 | deleterious | None | None | None | None | N |
S/G | 0.3748 | ambiguous | 0.2836 | benign | -0.932 | Destabilizing | 0.117 | N | 0.744 | deleterious | D | 0.660145157 | None | None | N |
S/H | 0.9763 | likely_pathogenic | 0.9623 | pathogenic | -1.433 | Destabilizing | 0.935 | D | 0.808 | deleterious | None | None | None | None | N |
S/I | 0.9595 | likely_pathogenic | 0.8871 | pathogenic | 0.238 | Stabilizing | 0.317 | N | 0.844 | deleterious | D | 0.728411945 | None | None | N |
S/K | 0.9981 | likely_pathogenic | 0.9973 | pathogenic | -0.967 | Destabilizing | 0.262 | N | 0.785 | deleterious | None | None | None | None | N |
S/L | 0.8917 | likely_pathogenic | 0.7776 | pathogenic | 0.238 | Stabilizing | 0.081 | N | 0.806 | deleterious | None | None | None | None | N |
S/M | 0.9408 | likely_pathogenic | 0.8864 | pathogenic | 0.249 | Stabilizing | 0.791 | D | 0.813 | deleterious | None | None | None | None | N |
S/N | 0.8995 | likely_pathogenic | 0.8426 | pathogenic | -1.178 | Destabilizing | 0.211 | N | 0.783 | deleterious | D | 0.785228913 | None | None | N |
S/P | 0.9895 | likely_pathogenic | 0.9814 | pathogenic | -0.003 | Destabilizing | 0.791 | D | 0.825 | deleterious | None | None | None | None | N |
S/Q | 0.9833 | likely_pathogenic | 0.9774 | pathogenic | -1.089 | Destabilizing | 0.791 | D | 0.763 | deleterious | None | None | None | None | N |
S/R | 0.9939 | likely_pathogenic | 0.9919 | pathogenic | -1.101 | Destabilizing | 0.741 | D | 0.822 | deleterious | D | 0.660145157 | None | None | N |
S/T | 0.498 | ambiguous | 0.3946 | ambiguous | -0.948 | Destabilizing | 0.117 | N | 0.739 | prob.delet. | D | 0.582461722 | None | None | N |
S/V | 0.8892 | likely_pathogenic | 0.7647 | pathogenic | -0.003 | Destabilizing | 0.081 | N | 0.818 | deleterious | None | None | None | None | N |
S/W | 0.9878 | likely_pathogenic | 0.9743 | pathogenic | -0.499 | Destabilizing | 0.935 | D | 0.87 | deleterious | None | None | None | None | N |
S/Y | 0.9766 | likely_pathogenic | 0.9469 | pathogenic | -0.174 | Destabilizing | 0.791 | D | 0.843 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.