Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16242 | 48949;48950;48951 | chr2:178614883;178614882;178614881 | chr2:179479610;179479609;179479608 |
N2AB | 14601 | 44026;44027;44028 | chr2:178614883;178614882;178614881 | chr2:179479610;179479609;179479608 |
N2A | 13674 | 41245;41246;41247 | chr2:178614883;178614882;178614881 | chr2:179479610;179479609;179479608 |
N2B | 7177 | 21754;21755;21756 | chr2:178614883;178614882;178614881 | chr2:179479610;179479609;179479608 |
Novex-1 | 7302 | 22129;22130;22131 | chr2:178614883;178614882;178614881 | chr2:179479610;179479609;179479608 |
Novex-2 | 7369 | 22330;22331;22332 | chr2:178614883;178614882;178614881 | chr2:179479610;179479609;179479608 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | rs2057021551 | None | 0.303 | N | 0.474 | 0.111 | 0.226586394389 | gnomAD-4.0.0 | 7.01908E-07 | None | None | None | None | N | None | 3.0434E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2628 | likely_benign | 0.2918 | benign | -0.034 | Destabilizing | 0.016 | N | 0.511 | neutral | None | None | None | None | N |
R/C | 0.2468 | likely_benign | 0.2718 | benign | -0.365 | Destabilizing | 0.869 | D | 0.391 | neutral | None | None | None | None | N |
R/D | 0.5861 | likely_pathogenic | 0.6357 | pathogenic | -0.35 | Destabilizing | 0.075 | N | 0.567 | neutral | None | None | None | None | N |
R/E | 0.31 | likely_benign | 0.3437 | ambiguous | -0.32 | Destabilizing | 0.016 | N | 0.429 | neutral | None | None | None | None | N |
R/F | 0.4133 | ambiguous | 0.4384 | ambiguous | -0.391 | Destabilizing | 0.637 | D | 0.439 | neutral | None | None | None | None | N |
R/G | 0.2427 | likely_benign | 0.2522 | benign | -0.148 | Destabilizing | 0.058 | N | 0.545 | neutral | N | 0.466796447 | None | None | N |
R/H | 0.1251 | likely_benign | 0.1369 | benign | -0.601 | Destabilizing | 0.366 | N | 0.505 | neutral | None | None | None | None | N |
R/I | 0.2008 | likely_benign | 0.2197 | benign | 0.219 | Stabilizing | 0.303 | N | 0.474 | neutral | N | 0.473213667 | None | None | N |
R/K | 0.056 | likely_benign | 0.0604 | benign | -0.285 | Destabilizing | None | N | 0.181 | neutral | N | 0.404224003 | None | None | N |
R/L | 0.169 | likely_benign | 0.1861 | benign | 0.219 | Stabilizing | 0.075 | N | 0.545 | neutral | None | None | None | None | N |
R/M | 0.2114 | likely_benign | 0.2221 | benign | -0.173 | Destabilizing | 0.637 | D | 0.48 | neutral | None | None | None | None | N |
R/N | 0.4167 | ambiguous | 0.4557 | ambiguous | -0.233 | Destabilizing | 0.075 | N | 0.501 | neutral | None | None | None | None | N |
R/P | 0.3011 | likely_benign | 0.3144 | benign | 0.151 | Stabilizing | 0.141 | N | 0.579 | neutral | None | None | None | None | N |
R/Q | 0.1017 | likely_benign | 0.1106 | benign | -0.255 | Destabilizing | 0.039 | N | 0.505 | neutral | None | None | None | None | N |
R/S | 0.3594 | ambiguous | 0.3984 | ambiguous | -0.388 | Destabilizing | 0.012 | N | 0.499 | neutral | N | 0.459502475 | None | None | N |
R/T | 0.1948 | likely_benign | 0.2123 | benign | -0.264 | Destabilizing | 0.058 | N | 0.525 | neutral | N | 0.459590113 | None | None | N |
R/V | 0.2268 | likely_benign | 0.2595 | benign | 0.151 | Stabilizing | 0.075 | N | 0.559 | neutral | None | None | None | None | N |
R/W | 0.2322 | likely_benign | 0.2239 | benign | -0.597 | Destabilizing | 0.869 | D | 0.391 | neutral | None | None | None | None | N |
R/Y | 0.3492 | ambiguous | 0.3627 | ambiguous | -0.203 | Destabilizing | 0.366 | N | 0.547 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.