Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16268 | 49027;49028;49029 | chr2:178614712;178614711;178614710 | chr2:179479439;179479438;179479437 |
N2AB | 14627 | 44104;44105;44106 | chr2:178614712;178614711;178614710 | chr2:179479439;179479438;179479437 |
N2A | 13700 | 41323;41324;41325 | chr2:178614712;178614711;178614710 | chr2:179479439;179479438;179479437 |
N2B | 7203 | 21832;21833;21834 | chr2:178614712;178614711;178614710 | chr2:179479439;179479438;179479437 |
Novex-1 | 7328 | 22207;22208;22209 | chr2:178614712;178614711;178614710 | chr2:179479439;179479438;179479437 |
Novex-2 | 7395 | 22408;22409;22410 | chr2:178614712;178614711;178614710 | chr2:179479439;179479438;179479437 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | rs1474027032 | None | 0.004 | N | 0.266 | 0.074 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
L/I | rs1474027032 | None | 0.004 | N | 0.266 | 0.074 | None | gnomAD-4.0.0 | 5.83361E-05 | None | None | None | None | N | None | 1.33826E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 7.71986E-05 | 0 | 3.20914E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8009 | likely_pathogenic | 0.8204 | pathogenic | -1.67 | Destabilizing | 0.648 | D | 0.607 | neutral | None | None | None | None | N |
L/C | 0.8151 | likely_pathogenic | 0.807 | pathogenic | -1.28 | Destabilizing | 0.993 | D | 0.737 | prob.delet. | None | None | None | None | N |
L/D | 0.9861 | likely_pathogenic | 0.9879 | pathogenic | -1.011 | Destabilizing | 0.929 | D | 0.835 | deleterious | None | None | None | None | N |
L/E | 0.9078 | likely_pathogenic | 0.9121 | pathogenic | -0.969 | Destabilizing | 0.929 | D | 0.844 | deleterious | None | None | None | None | N |
L/F | 0.4543 | ambiguous | 0.4662 | ambiguous | -1.054 | Destabilizing | 0.83 | D | 0.757 | deleterious | D | 0.566409796 | None | None | N |
L/G | 0.974 | likely_pathogenic | 0.9771 | pathogenic | -2.033 | Highly Destabilizing | 0.929 | D | 0.831 | deleterious | None | None | None | None | N |
L/H | 0.8174 | likely_pathogenic | 0.8349 | pathogenic | -1.204 | Destabilizing | 0.991 | D | 0.817 | deleterious | D | 0.556799195 | None | None | N |
L/I | 0.0808 | likely_benign | 0.0854 | benign | -0.734 | Destabilizing | 0.004 | N | 0.266 | neutral | N | 0.479930241 | None | None | N |
L/K | 0.7606 | likely_pathogenic | 0.7777 | pathogenic | -1.268 | Destabilizing | 0.929 | D | 0.825 | deleterious | None | None | None | None | N |
L/M | 0.1628 | likely_benign | 0.179 | benign | -0.733 | Destabilizing | 0.866 | D | 0.767 | deleterious | None | None | None | None | N |
L/N | 0.8919 | likely_pathogenic | 0.9075 | pathogenic | -1.185 | Destabilizing | 0.976 | D | 0.837 | deleterious | None | None | None | None | N |
L/P | 0.9884 | likely_pathogenic | 0.9905 | pathogenic | -1.015 | Destabilizing | 0.968 | D | 0.837 | deleterious | D | 0.604457417 | None | None | N |
L/Q | 0.6763 | likely_pathogenic | 0.7054 | pathogenic | -1.269 | Destabilizing | 0.993 | D | 0.828 | deleterious | None | None | None | None | N |
L/R | 0.7894 | likely_pathogenic | 0.8081 | pathogenic | -0.753 | Destabilizing | 0.908 | D | 0.843 | deleterious | D | 0.541353694 | None | None | N |
L/S | 0.9234 | likely_pathogenic | 0.9359 | pathogenic | -1.841 | Destabilizing | 0.929 | D | 0.826 | deleterious | None | None | None | None | N |
L/T | 0.7558 | likely_pathogenic | 0.7857 | pathogenic | -1.662 | Destabilizing | 0.866 | D | 0.767 | deleterious | None | None | None | None | N |
L/V | 0.1456 | likely_benign | 0.1563 | benign | -1.015 | Destabilizing | 0.09 | N | 0.467 | neutral | N | 0.492125213 | None | None | N |
L/W | 0.8138 | likely_pathogenic | 0.8247 | pathogenic | -1.13 | Destabilizing | 0.993 | D | 0.772 | deleterious | None | None | None | None | N |
L/Y | 0.791 | likely_pathogenic | 0.8012 | pathogenic | -0.911 | Destabilizing | 0.929 | D | 0.824 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.