Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16272 | 49039;49040;49041 | chr2:178614700;178614699;178614698 | chr2:179479427;179479426;179479425 |
N2AB | 14631 | 44116;44117;44118 | chr2:178614700;178614699;178614698 | chr2:179479427;179479426;179479425 |
N2A | 13704 | 41335;41336;41337 | chr2:178614700;178614699;178614698 | chr2:179479427;179479426;179479425 |
N2B | 7207 | 21844;21845;21846 | chr2:178614700;178614699;178614698 | chr2:179479427;179479426;179479425 |
Novex-1 | 7332 | 22219;22220;22221 | chr2:178614700;178614699;178614698 | chr2:179479427;179479426;179479425 |
Novex-2 | 7399 | 22420;22421;22422 | chr2:178614700;178614699;178614698 | chr2:179479427;179479426;179479425 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 1.0 | N | 0.721 | 0.276 | 0.238096912614 | gnomAD-4.0.0 | 1.59525E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86441E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8497 | likely_pathogenic | 0.8121 | pathogenic | -0.807 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
A/D | 0.9602 | likely_pathogenic | 0.9504 | pathogenic | -0.845 | Destabilizing | 1.0 | D | 0.793 | deleterious | N | 0.506647873 | None | None | N |
A/E | 0.8547 | likely_pathogenic | 0.8303 | pathogenic | -0.992 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
A/F | 0.9401 | likely_pathogenic | 0.9136 | pathogenic | -1.158 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
A/G | 0.5708 | likely_pathogenic | 0.522 | ambiguous | -0.66 | Destabilizing | 1.0 | D | 0.549 | neutral | D | 0.596073975 | None | None | N |
A/H | 0.9443 | likely_pathogenic | 0.924 | pathogenic | -0.7 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
A/I | 0.8024 | likely_pathogenic | 0.7509 | pathogenic | -0.529 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
A/K | 0.9315 | likely_pathogenic | 0.9207 | pathogenic | -0.827 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
A/L | 0.8061 | likely_pathogenic | 0.7747 | pathogenic | -0.529 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
A/M | 0.7809 | likely_pathogenic | 0.7422 | pathogenic | -0.35 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
A/N | 0.876 | likely_pathogenic | 0.852 | pathogenic | -0.481 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
A/P | 0.9617 | likely_pathogenic | 0.9445 | pathogenic | -0.509 | Destabilizing | 1.0 | D | 0.767 | deleterious | N | 0.44252616 | None | None | N |
A/Q | 0.8027 | likely_pathogenic | 0.7754 | pathogenic | -0.819 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
A/R | 0.8841 | likely_pathogenic | 0.8653 | pathogenic | -0.308 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
A/S | 0.2438 | likely_benign | 0.2203 | benign | -0.701 | Destabilizing | 1.0 | D | 0.557 | neutral | N | 0.45111894 | None | None | N |
A/T | 0.5277 | ambiguous | 0.469 | ambiguous | -0.776 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | N | 0.482765378 | None | None | N |
A/V | 0.4377 | ambiguous | 0.3859 | ambiguous | -0.509 | Destabilizing | 1.0 | D | 0.642 | neutral | N | 0.444853666 | None | None | N |
A/W | 0.9925 | likely_pathogenic | 0.9883 | pathogenic | -1.285 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
A/Y | 0.9574 | likely_pathogenic | 0.9377 | pathogenic | -0.942 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.