Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16277 | 49054;49055;49056 | chr2:178614685;178614684;178614683 | chr2:179479412;179479411;179479410 |
N2AB | 14636 | 44131;44132;44133 | chr2:178614685;178614684;178614683 | chr2:179479412;179479411;179479410 |
N2A | 13709 | 41350;41351;41352 | chr2:178614685;178614684;178614683 | chr2:179479412;179479411;179479410 |
N2B | 7212 | 21859;21860;21861 | chr2:178614685;178614684;178614683 | chr2:179479412;179479411;179479410 |
Novex-1 | 7337 | 22234;22235;22236 | chr2:178614685;178614684;178614683 | chr2:179479412;179479411;179479410 |
Novex-2 | 7404 | 22435;22436;22437 | chr2:178614685;178614684;178614683 | chr2:179479412;179479411;179479410 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1325831010 | -0.431 | 0.999 | N | 0.593 | 0.391 | 0.248417906384 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
E/K | rs1325831010 | -0.431 | 0.999 | N | 0.593 | 0.391 | 0.248417906384 | gnomAD-4.0.0 | 1.59478E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2811 | likely_benign | 0.2985 | benign | -0.582 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | N | 0.448265338 | None | None | N |
E/C | 0.8905 | likely_pathogenic | 0.8968 | pathogenic | -0.333 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
E/D | 0.2346 | likely_benign | 0.2316 | benign | -0.837 | Destabilizing | 0.999 | D | 0.517 | neutral | N | 0.451530256 | None | None | N |
E/F | 0.8948 | likely_pathogenic | 0.8829 | pathogenic | 0.021 | Stabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
E/G | 0.6137 | likely_pathogenic | 0.6106 | pathogenic | -0.913 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | D | 0.590061918 | None | None | N |
E/H | 0.6754 | likely_pathogenic | 0.6674 | pathogenic | -0.013 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/I | 0.3376 | likely_benign | 0.3519 | ambiguous | 0.307 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
E/K | 0.4668 | ambiguous | 0.4597 | ambiguous | -0.109 | Destabilizing | 0.999 | D | 0.593 | neutral | N | 0.447711249 | None | None | N |
E/L | 0.5509 | ambiguous | 0.5723 | pathogenic | 0.307 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
E/M | 0.5583 | ambiguous | 0.5788 | pathogenic | 0.493 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/N | 0.4435 | ambiguous | 0.4443 | ambiguous | -0.719 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/P | 0.9654 | likely_pathogenic | 0.9699 | pathogenic | 0.033 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/Q | 0.2235 | likely_benign | 0.2326 | benign | -0.585 | Destabilizing | 1.0 | D | 0.643 | neutral | N | 0.452573599 | None | None | N |
E/R | 0.641 | likely_pathogenic | 0.6218 | pathogenic | 0.211 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/S | 0.3273 | likely_benign | 0.3379 | benign | -0.928 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
E/T | 0.2328 | likely_benign | 0.2445 | benign | -0.644 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
E/V | 0.1928 | likely_benign | 0.2093 | benign | 0.033 | Stabilizing | 1.0 | D | 0.747 | deleterious | N | 0.429320485 | None | None | N |
E/W | 0.982 | likely_pathogenic | 0.9778 | pathogenic | 0.301 | Stabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
E/Y | 0.8604 | likely_pathogenic | 0.8362 | pathogenic | 0.297 | Stabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.