Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16281 | 49066;49067;49068 | chr2:178614673;178614672;178614671 | chr2:179479400;179479399;179479398 |
N2AB | 14640 | 44143;44144;44145 | chr2:178614673;178614672;178614671 | chr2:179479400;179479399;179479398 |
N2A | 13713 | 41362;41363;41364 | chr2:178614673;178614672;178614671 | chr2:179479400;179479399;179479398 |
N2B | 7216 | 21871;21872;21873 | chr2:178614673;178614672;178614671 | chr2:179479400;179479399;179479398 |
Novex-1 | 7341 | 22246;22247;22248 | chr2:178614673;178614672;178614671 | chr2:179479400;179479399;179479398 |
Novex-2 | 7408 | 22447;22448;22449 | chr2:178614673;178614672;178614671 | chr2:179479400;179479399;179479398 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1553703631 | None | 0.473 | N | 0.631 | 0.134 | 0.426670027402 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1553703631 | None | 0.473 | N | 0.631 | 0.134 | 0.426670027402 | gnomAD-4.0.0 | 6.58293E-06 | None | None | None | None | N | None | 0 | 6.56254E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1211 | likely_benign | 0.0999 | benign | -0.188 | Destabilizing | 0.425 | N | 0.449 | neutral | N | 0.465166958 | None | None | N |
T/C | 0.5415 | ambiguous | 0.4908 | ambiguous | -0.296 | Destabilizing | 0.995 | D | 0.62 | neutral | None | None | None | None | N |
T/D | 0.5236 | ambiguous | 0.4325 | ambiguous | 0.166 | Stabilizing | 0.007 | N | 0.35 | neutral | None | None | None | None | N |
T/E | 0.4146 | ambiguous | 0.3289 | benign | 0.084 | Stabilizing | 0.013 | N | 0.327 | neutral | None | None | None | None | N |
T/F | 0.382 | ambiguous | 0.3351 | benign | -0.738 | Destabilizing | 0.944 | D | 0.684 | prob.neutral | None | None | None | None | N |
T/G | 0.4368 | ambiguous | 0.3773 | ambiguous | -0.292 | Destabilizing | 0.704 | D | 0.643 | neutral | None | None | None | None | N |
T/H | 0.3802 | ambiguous | 0.3175 | benign | -0.523 | Destabilizing | 0.944 | D | 0.665 | neutral | None | None | None | None | N |
T/I | 0.2119 | likely_benign | 0.184 | benign | -0.041 | Destabilizing | 0.473 | N | 0.631 | neutral | N | 0.499009215 | None | None | N |
T/K | 0.3111 | likely_benign | 0.2493 | benign | -0.295 | Destabilizing | 0.007 | N | 0.351 | neutral | None | None | None | None | N |
T/L | 0.149 | likely_benign | 0.1334 | benign | -0.041 | Destabilizing | 0.329 | N | 0.587 | neutral | None | None | None | None | N |
T/M | 0.1238 | likely_benign | 0.1053 | benign | -0.031 | Destabilizing | 0.944 | D | 0.645 | neutral | None | None | None | None | N |
T/N | 0.1967 | likely_benign | 0.1613 | benign | -0.091 | Destabilizing | 0.642 | D | 0.512 | neutral | N | 0.492666247 | None | None | N |
T/P | 0.7257 | likely_pathogenic | 0.6644 | pathogenic | -0.062 | Destabilizing | 0.784 | D | 0.679 | prob.neutral | N | 0.475040877 | None | None | N |
T/Q | 0.3235 | likely_benign | 0.2606 | benign | -0.303 | Destabilizing | 0.704 | D | 0.651 | neutral | None | None | None | None | N |
T/R | 0.3151 | likely_benign | 0.2474 | benign | -0.024 | Destabilizing | 0.007 | N | 0.503 | neutral | None | None | None | None | N |
T/S | 0.1734 | likely_benign | 0.1427 | benign | -0.274 | Destabilizing | 0.425 | N | 0.474 | neutral | N | 0.465616644 | None | None | N |
T/V | 0.1369 | likely_benign | 0.1226 | benign | -0.062 | Destabilizing | 0.031 | N | 0.263 | neutral | None | None | None | None | N |
T/W | 0.7486 | likely_pathogenic | 0.696 | pathogenic | -0.79 | Destabilizing | 0.995 | D | 0.672 | neutral | None | None | None | None | N |
T/Y | 0.3985 | ambiguous | 0.3585 | ambiguous | -0.48 | Destabilizing | 0.981 | D | 0.685 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.