Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16285 | 49078;49079;49080 | chr2:178614661;178614660;178614659 | chr2:179479388;179479387;179479386 |
N2AB | 14644 | 44155;44156;44157 | chr2:178614661;178614660;178614659 | chr2:179479388;179479387;179479386 |
N2A | 13717 | 41374;41375;41376 | chr2:178614661;178614660;178614659 | chr2:179479388;179479387;179479386 |
N2B | 7220 | 21883;21884;21885 | chr2:178614661;178614660;178614659 | chr2:179479388;179479387;179479386 |
Novex-1 | 7345 | 22258;22259;22260 | chr2:178614661;178614660;178614659 | chr2:179479388;179479387;179479386 |
Novex-2 | 7412 | 22459;22460;22461 | chr2:178614661;178614660;178614659 | chr2:179479388;179479387;179479386 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs780017546 | 0.183 | 0.946 | N | 0.681 | 0.232 | 0.236890367714 | gnomAD-2.1.1 | 2.83E-05 | None | None | None | None | I | None | 0 | 0 | None | 5.98683E-04 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
K/Q | rs780017546 | 0.183 | 0.946 | N | 0.681 | 0.232 | 0.236890367714 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 1.15407E-03 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/Q | rs780017546 | 0.183 | 0.946 | N | 0.681 | 0.232 | 0.236890367714 | gnomAD-4.0.0 | 1.11643E-05 | None | None | None | None | I | None | 0 | 0 | None | 4.73581E-04 | 0 | None | 0 | 0 | 3.39239E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8458 | likely_pathogenic | 0.8706 | pathogenic | 0.096 | Stabilizing | 0.87 | D | 0.633 | neutral | None | None | None | None | I |
K/C | 0.8424 | likely_pathogenic | 0.8537 | pathogenic | -0.23 | Destabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | I |
K/D | 0.966 | likely_pathogenic | 0.9725 | pathogenic | -0.186 | Destabilizing | 0.959 | D | 0.679 | prob.neutral | None | None | None | None | I |
K/E | 0.6955 | likely_pathogenic | 0.739 | pathogenic | -0.195 | Destabilizing | 0.716 | D | 0.594 | neutral | N | 0.487810275 | None | None | I |
K/F | 0.9137 | likely_pathogenic | 0.9264 | pathogenic | -0.192 | Destabilizing | 0.994 | D | 0.716 | prob.delet. | None | None | None | None | I |
K/G | 0.9299 | likely_pathogenic | 0.9416 | pathogenic | -0.054 | Destabilizing | 0.959 | D | 0.611 | neutral | None | None | None | None | I |
K/H | 0.502 | ambiguous | 0.5484 | ambiguous | -0.205 | Destabilizing | 0.994 | D | 0.689 | prob.neutral | None | None | None | None | I |
K/I | 0.5717 | likely_pathogenic | 0.6109 | pathogenic | 0.412 | Stabilizing | 0.973 | D | 0.716 | prob.delet. | N | 0.497690548 | None | None | I |
K/L | 0.6333 | likely_pathogenic | 0.6716 | pathogenic | 0.412 | Stabilizing | 0.959 | D | 0.611 | neutral | None | None | None | None | I |
K/M | 0.504 | ambiguous | 0.5431 | ambiguous | 0.052 | Stabilizing | 0.998 | D | 0.695 | prob.neutral | None | None | None | None | I |
K/N | 0.8529 | likely_pathogenic | 0.8826 | pathogenic | 0.24 | Stabilizing | 0.946 | D | 0.689 | prob.neutral | N | 0.490629667 | None | None | I |
K/P | 0.9944 | likely_pathogenic | 0.9939 | pathogenic | 0.332 | Stabilizing | 0.979 | D | 0.677 | prob.neutral | None | None | None | None | I |
K/Q | 0.3401 | ambiguous | 0.3889 | ambiguous | 0.082 | Stabilizing | 0.946 | D | 0.681 | prob.neutral | N | 0.50734685 | None | None | I |
K/R | 0.1138 | likely_benign | 0.1177 | benign | 0.014 | Stabilizing | 0.035 | N | 0.376 | neutral | N | 0.478778735 | None | None | I |
K/S | 0.8618 | likely_pathogenic | 0.8958 | pathogenic | -0.134 | Destabilizing | 0.87 | D | 0.653 | neutral | None | None | None | None | I |
K/T | 0.5782 | likely_pathogenic | 0.6336 | pathogenic | -0.02 | Destabilizing | 0.946 | D | 0.644 | neutral | N | 0.509040832 | None | None | I |
K/V | 0.5717 | likely_pathogenic | 0.6162 | pathogenic | 0.332 | Stabilizing | 0.959 | D | 0.683 | prob.neutral | None | None | None | None | I |
K/W | 0.9219 | likely_pathogenic | 0.9296 | pathogenic | -0.285 | Destabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | I |
K/Y | 0.8392 | likely_pathogenic | 0.8622 | pathogenic | 0.071 | Stabilizing | 0.979 | D | 0.716 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.