Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16304 | 49135;49136;49137 | chr2:178614604;178614603;178614602 | chr2:179479331;179479330;179479329 |
N2AB | 14663 | 44212;44213;44214 | chr2:178614604;178614603;178614602 | chr2:179479331;179479330;179479329 |
N2A | 13736 | 41431;41432;41433 | chr2:178614604;178614603;178614602 | chr2:179479331;179479330;179479329 |
N2B | 7239 | 21940;21941;21942 | chr2:178614604;178614603;178614602 | chr2:179479331;179479330;179479329 |
Novex-1 | 7364 | 22315;22316;22317 | chr2:178614604;178614603;178614602 | chr2:179479331;179479330;179479329 |
Novex-2 | 7431 | 22516;22517;22518 | chr2:178614604;178614603;178614602 | chr2:179479331;179479330;179479329 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | None | None | 1.0 | D | 0.717 | 0.434 | 0.567858160113 | gnomAD-4.0.0 | 2.0542E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7998E-06 | 0 | 1.65887E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9342 | likely_pathogenic | 0.9138 | pathogenic | -0.955 | Destabilizing | 0.999 | D | 0.509 | neutral | None | None | None | None | N |
R/C | 0.5993 | likely_pathogenic | 0.5626 | ambiguous | -0.877 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
R/D | 0.9102 | likely_pathogenic | 0.8908 | pathogenic | -0.093 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
R/E | 0.8604 | likely_pathogenic | 0.8206 | pathogenic | 0.049 | Stabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | N |
R/F | 0.957 | likely_pathogenic | 0.9486 | pathogenic | -0.689 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
R/G | 0.8233 | likely_pathogenic | 0.787 | pathogenic | -1.29 | Destabilizing | 1.0 | D | 0.655 | neutral | D | 0.578902866 | None | None | N |
R/H | 0.2657 | likely_benign | 0.2383 | benign | -1.531 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
R/I | 0.8662 | likely_pathogenic | 0.8222 | pathogenic | -0.044 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | D | 0.624805914 | None | None | N |
R/K | 0.4543 | ambiguous | 0.384 | ambiguous | -0.963 | Destabilizing | 0.997 | D | 0.456 | neutral | N | 0.50716763 | None | None | N |
R/L | 0.8262 | likely_pathogenic | 0.7832 | pathogenic | -0.044 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
R/M | 0.879 | likely_pathogenic | 0.8525 | pathogenic | -0.376 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
R/N | 0.8022 | likely_pathogenic | 0.7695 | pathogenic | -0.441 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
R/P | 0.9714 | likely_pathogenic | 0.9675 | pathogenic | -0.327 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
R/Q | 0.3583 | ambiguous | 0.3225 | benign | -0.564 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
R/S | 0.9179 | likely_pathogenic | 0.8922 | pathogenic | -1.257 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | D | 0.548435402 | None | None | N |
R/T | 0.7922 | likely_pathogenic | 0.7238 | pathogenic | -0.922 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | D | 0.60437028 | None | None | N |
R/V | 0.9175 | likely_pathogenic | 0.8932 | pathogenic | -0.327 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
R/W | 0.6397 | likely_pathogenic | 0.618 | pathogenic | -0.298 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
R/Y | 0.8081 | likely_pathogenic | 0.7807 | pathogenic | -0.029 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.