Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16312 | 49159;49160;49161 | chr2:178614580;178614579;178614578 | chr2:179479307;179479306;179479305 |
N2AB | 14671 | 44236;44237;44238 | chr2:178614580;178614579;178614578 | chr2:179479307;179479306;179479305 |
N2A | 13744 | 41455;41456;41457 | chr2:178614580;178614579;178614578 | chr2:179479307;179479306;179479305 |
N2B | 7247 | 21964;21965;21966 | chr2:178614580;178614579;178614578 | chr2:179479307;179479306;179479305 |
Novex-1 | 7372 | 22339;22340;22341 | chr2:178614580;178614579;178614578 | chr2:179479307;179479306;179479305 |
Novex-2 | 7439 | 22540;22541;22542 | chr2:178614580;178614579;178614578 | chr2:179479307;179479306;179479305 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | None | N | 0.137 | 0.115 | 0.0551355673512 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3761 | ambiguous | 0.3635 | ambiguous | -0.052 | Destabilizing | 0.129 | N | 0.365 | neutral | None | None | None | None | N |
K/C | 0.652 | likely_pathogenic | 0.6325 | pathogenic | -0.195 | Destabilizing | 0.983 | D | 0.493 | neutral | None | None | None | None | N |
K/D | 0.5669 | likely_pathogenic | 0.5216 | ambiguous | 0.059 | Stabilizing | 0.129 | N | 0.421 | neutral | None | None | None | None | N |
K/E | 0.2439 | likely_benign | 0.2153 | benign | 0.102 | Stabilizing | 0.183 | N | 0.279 | neutral | N | 0.494041351 | None | None | N |
K/F | 0.8288 | likely_pathogenic | 0.8367 | pathogenic | -0.026 | Destabilizing | 0.94 | D | 0.513 | neutral | None | None | None | None | N |
K/G | 0.2313 | likely_benign | 0.2149 | benign | -0.32 | Destabilizing | None | N | 0.237 | neutral | None | None | None | None | N |
K/H | 0.3604 | ambiguous | 0.3412 | ambiguous | -0.635 | Destabilizing | 0.716 | D | 0.46 | neutral | None | None | None | None | N |
K/I | 0.6332 | likely_pathogenic | 0.6636 | pathogenic | 0.594 | Stabilizing | 0.836 | D | 0.517 | neutral | None | None | None | None | N |
K/L | 0.4746 | ambiguous | 0.4739 | ambiguous | 0.594 | Stabilizing | 0.418 | N | 0.493 | neutral | None | None | None | None | N |
K/M | 0.3325 | likely_benign | 0.3338 | benign | 0.296 | Stabilizing | 0.921 | D | 0.457 | neutral | N | 0.515077874 | None | None | N |
K/N | 0.3992 | ambiguous | 0.3786 | ambiguous | 0.07 | Stabilizing | None | N | 0.137 | neutral | N | 0.460287045 | None | None | N |
K/P | 0.7901 | likely_pathogenic | 0.7778 | pathogenic | 0.409 | Stabilizing | 0.593 | D | 0.469 | neutral | None | None | None | None | N |
K/Q | 0.1456 | likely_benign | 0.1364 | benign | -0.042 | Destabilizing | 0.351 | N | 0.363 | neutral | N | 0.506954722 | None | None | N |
K/R | 0.0902 | likely_benign | 0.0888 | benign | -0.254 | Destabilizing | 0.351 | N | 0.272 | neutral | N | 0.50846802 | None | None | N |
K/S | 0.4026 | ambiguous | 0.3737 | ambiguous | -0.421 | Destabilizing | 0.129 | N | 0.259 | neutral | None | None | None | None | N |
K/T | 0.277 | likely_benign | 0.2711 | benign | -0.212 | Destabilizing | 0.351 | N | 0.404 | neutral | N | 0.483783015 | None | None | N |
K/V | 0.5214 | ambiguous | 0.5355 | ambiguous | 0.409 | Stabilizing | 0.593 | D | 0.518 | neutral | None | None | None | None | N |
K/W | 0.8264 | likely_pathogenic | 0.8222 | pathogenic | -0.02 | Destabilizing | 0.983 | D | 0.514 | neutral | None | None | None | None | N |
K/Y | 0.6673 | likely_pathogenic | 0.6761 | pathogenic | 0.299 | Stabilizing | 0.94 | D | 0.504 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.