Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16314 | 49165;49166;49167 | chr2:178614574;178614573;178614572 | chr2:179479301;179479300;179479299 |
N2AB | 14673 | 44242;44243;44244 | chr2:178614574;178614573;178614572 | chr2:179479301;179479300;179479299 |
N2A | 13746 | 41461;41462;41463 | chr2:178614574;178614573;178614572 | chr2:179479301;179479300;179479299 |
N2B | 7249 | 21970;21971;21972 | chr2:178614574;178614573;178614572 | chr2:179479301;179479300;179479299 |
Novex-1 | 7374 | 22345;22346;22347 | chr2:178614574;178614573;178614572 | chr2:179479301;179479300;179479299 |
Novex-2 | 7441 | 22546;22547;22548 | chr2:178614574;178614573;178614572 | chr2:179479301;179479300;179479299 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | rs375909143 | -0.354 | 1.0 | N | 0.867 | 0.438 | None | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2186 | likely_benign | 0.2154 | benign | -0.751 | Destabilizing | 0.997 | D | 0.618 | neutral | N | 0.437258266 | None | None | N |
S/C | 0.2704 | likely_benign | 0.2898 | benign | -0.5 | Destabilizing | 1.0 | D | 0.845 | deleterious | N | 0.48021072 | None | None | N |
S/D | 0.9901 | likely_pathogenic | 0.9901 | pathogenic | -1.28 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
S/E | 0.9935 | likely_pathogenic | 0.9938 | pathogenic | -1.073 | Destabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | N |
S/F | 0.9784 | likely_pathogenic | 0.9794 | pathogenic | -0.653 | Destabilizing | 1.0 | D | 0.868 | deleterious | N | 0.513690021 | None | None | N |
S/G | 0.5556 | ambiguous | 0.5348 | ambiguous | -1.16 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
S/H | 0.9749 | likely_pathogenic | 0.9751 | pathogenic | -1.572 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
S/I | 0.8915 | likely_pathogenic | 0.8892 | pathogenic | 0.295 | Stabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
S/K | 0.9989 | likely_pathogenic | 0.9987 | pathogenic | -0.017 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
S/L | 0.7916 | likely_pathogenic | 0.7816 | pathogenic | 0.295 | Stabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
S/M | 0.7904 | likely_pathogenic | 0.7805 | pathogenic | 0.223 | Stabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
S/N | 0.8777 | likely_pathogenic | 0.9002 | pathogenic | -0.773 | Destabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | N |
S/P | 0.9973 | likely_pathogenic | 0.9973 | pathogenic | -0.018 | Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.525855123 | None | None | N |
S/Q | 0.9863 | likely_pathogenic | 0.9861 | pathogenic | -0.494 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
S/R | 0.9985 | likely_pathogenic | 0.9982 | pathogenic | -0.523 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
S/T | 0.1772 | likely_benign | 0.1834 | benign | -0.425 | Destabilizing | 0.999 | D | 0.625 | neutral | N | 0.451513831 | None | None | N |
S/V | 0.7846 | likely_pathogenic | 0.786 | pathogenic | -0.018 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
S/W | 0.9861 | likely_pathogenic | 0.9846 | pathogenic | -0.919 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
S/Y | 0.957 | likely_pathogenic | 0.9558 | pathogenic | -0.446 | Destabilizing | 1.0 | D | 0.867 | deleterious | N | 0.438003393 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.