Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16328 | 49207;49208;49209 | chr2:178614532;178614531;178614530 | chr2:179479259;179479258;179479257 |
N2AB | 14687 | 44284;44285;44286 | chr2:178614532;178614531;178614530 | chr2:179479259;179479258;179479257 |
N2A | 13760 | 41503;41504;41505 | chr2:178614532;178614531;178614530 | chr2:179479259;179479258;179479257 |
N2B | 7263 | 22012;22013;22014 | chr2:178614532;178614531;178614530 | chr2:179479259;179479258;179479257 |
Novex-1 | 7388 | 22387;22388;22389 | chr2:178614532;178614531;178614530 | chr2:179479259;179479258;179479257 |
Novex-2 | 7455 | 22588;22589;22590 | chr2:178614532;178614531;178614530 | chr2:179479259;179479258;179479257 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs770839243 | -0.139 | 0.908 | N | 0.781 | 0.323 | 0.362361684037 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.82E-05 | None | 0 | 0 | 1.66611E-04 |
T/I | rs770839243 | -0.139 | 0.908 | N | 0.781 | 0.323 | 0.362361684037 | gnomAD-4.0.0 | 6.16275E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 8.12423E-05 | 3.31675E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1682 | likely_benign | 0.2517 | benign | -0.946 | Destabilizing | 0.581 | D | 0.532 | neutral | D | 0.531661587 | None | None | N |
T/C | 0.5792 | likely_pathogenic | 0.6975 | pathogenic | -0.575 | Destabilizing | 0.993 | D | 0.759 | deleterious | None | None | None | None | N |
T/D | 0.7245 | likely_pathogenic | 0.8228 | pathogenic | -0.067 | Destabilizing | 0.866 | D | 0.759 | deleterious | None | None | None | None | N |
T/E | 0.6352 | likely_pathogenic | 0.7731 | pathogenic | -0.01 | Destabilizing | 0.764 | D | 0.704 | prob.neutral | None | None | None | None | N |
T/F | 0.5658 | likely_pathogenic | 0.7323 | pathogenic | -0.839 | Destabilizing | 0.929 | D | 0.806 | deleterious | None | None | None | None | N |
T/G | 0.5567 | ambiguous | 0.6584 | pathogenic | -1.259 | Destabilizing | 0.866 | D | 0.705 | prob.neutral | None | None | None | None | N |
T/H | 0.4712 | ambiguous | 0.6542 | pathogenic | -1.393 | Destabilizing | 0.98 | D | 0.803 | deleterious | None | None | None | None | N |
T/I | 0.287 | likely_benign | 0.4465 | ambiguous | -0.186 | Destabilizing | 0.908 | D | 0.781 | deleterious | N | 0.510483256 | None | None | N |
T/K | 0.3692 | ambiguous | 0.5919 | pathogenic | -0.642 | Destabilizing | 0.41 | N | 0.635 | neutral | N | 0.4930014 | None | None | N |
T/L | 0.1893 | likely_benign | 0.2988 | benign | -0.186 | Destabilizing | 0.648 | D | 0.625 | neutral | None | None | None | None | N |
T/M | 0.1385 | likely_benign | 0.222 | benign | -0.058 | Destabilizing | 0.993 | D | 0.775 | deleterious | None | None | None | None | N |
T/N | 0.2151 | likely_benign | 0.3019 | benign | -0.728 | Destabilizing | 0.866 | D | 0.67 | neutral | None | None | None | None | N |
T/P | 0.3607 | ambiguous | 0.4996 | ambiguous | -0.406 | Destabilizing | 0.908 | D | 0.778 | deleterious | D | 0.577557694 | None | None | N |
T/Q | 0.3699 | ambiguous | 0.5443 | ambiguous | -0.758 | Destabilizing | 0.866 | D | 0.782 | deleterious | None | None | None | None | N |
T/R | 0.3421 | ambiguous | 0.5627 | ambiguous | -0.531 | Destabilizing | 0.01 | N | 0.321 | neutral | N | 0.511225391 | None | None | N |
T/S | 0.2365 | likely_benign | 0.3207 | benign | -1.08 | Destabilizing | 0.581 | D | 0.528 | neutral | N | 0.506845012 | None | None | N |
T/V | 0.2204 | likely_benign | 0.3287 | benign | -0.406 | Destabilizing | 0.648 | D | 0.584 | neutral | None | None | None | None | N |
T/W | 0.8116 | likely_pathogenic | 0.9077 | pathogenic | -0.783 | Destabilizing | 0.993 | D | 0.779 | deleterious | None | None | None | None | N |
T/Y | 0.5079 | ambiguous | 0.6727 | pathogenic | -0.535 | Destabilizing | 0.929 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.