Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16329 | 49210;49211;49212 | chr2:178614529;178614528;178614527 | chr2:179479256;179479255;179479254 |
N2AB | 14688 | 44287;44288;44289 | chr2:178614529;178614528;178614527 | chr2:179479256;179479255;179479254 |
N2A | 13761 | 41506;41507;41508 | chr2:178614529;178614528;178614527 | chr2:179479256;179479255;179479254 |
N2B | 7264 | 22015;22016;22017 | chr2:178614529;178614528;178614527 | chr2:179479256;179479255;179479254 |
Novex-1 | 7389 | 22390;22391;22392 | chr2:178614529;178614528;178614527 | chr2:179479256;179479255;179479254 |
Novex-2 | 7456 | 22591;22592;22593 | chr2:178614529;178614528;178614527 | chr2:179479256;179479255;179479254 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1456507512 | -0.707 | 1.0 | D | 0.823 | 0.855 | 0.896210243133 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 9.99E-05 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/C | rs1456507512 | -0.707 | 1.0 | D | 0.823 | 0.855 | 0.896210243133 | gnomAD-4.0.0 | 2.73902E-06 | None | None | None | None | N | None | 0 | 0 | None | 7.66754E-05 | 0 | None | 0 | 0 | 8.99892E-07 | 0 | 1.65854E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9985 | likely_pathogenic | 0.9985 | pathogenic | -2.159 | Highly Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
Y/C | 0.963 | likely_pathogenic | 0.9643 | pathogenic | -1.688 | Destabilizing | 1.0 | D | 0.823 | deleterious | D | 0.830037856 | None | None | N |
Y/D | 0.999 | likely_pathogenic | 0.9989 | pathogenic | -2.174 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | D | 0.830037856 | None | None | N |
Y/E | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -1.927 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Y/F | 0.2304 | likely_benign | 0.2316 | benign | -0.62 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | D | 0.715713032 | None | None | N |
Y/G | 0.9973 | likely_pathogenic | 0.9972 | pathogenic | -2.613 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
Y/H | 0.9902 | likely_pathogenic | 0.9888 | pathogenic | -1.7 | Destabilizing | 1.0 | D | 0.795 | deleterious | D | 0.830682456 | None | None | N |
Y/I | 0.9738 | likely_pathogenic | 0.9745 | pathogenic | -0.679 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
Y/K | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -1.779 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
Y/L | 0.9426 | likely_pathogenic | 0.943 | pathogenic | -0.679 | Destabilizing | 0.999 | D | 0.792 | deleterious | None | None | None | None | N |
Y/M | 0.9879 | likely_pathogenic | 0.988 | pathogenic | -0.806 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
Y/N | 0.9946 | likely_pathogenic | 0.994 | pathogenic | -2.616 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | D | 0.830037856 | None | None | N |
Y/P | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -1.184 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
Y/Q | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -2.158 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
Y/R | 0.9986 | likely_pathogenic | 0.9985 | pathogenic | -2.008 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Y/S | 0.9957 | likely_pathogenic | 0.9952 | pathogenic | -3.079 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.830037856 | None | None | N |
Y/T | 0.9983 | likely_pathogenic | 0.9982 | pathogenic | -2.687 | Highly Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
Y/V | 0.9557 | likely_pathogenic | 0.9571 | pathogenic | -1.184 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
Y/W | 0.7636 | likely_pathogenic | 0.7772 | pathogenic | 0.039 | Stabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.