Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16331 | 49216;49217;49218 | chr2:178614523;178614522;178614521 | chr2:179479250;179479249;179479248 |
N2AB | 14690 | 44293;44294;44295 | chr2:178614523;178614522;178614521 | chr2:179479250;179479249;179479248 |
N2A | 13763 | 41512;41513;41514 | chr2:178614523;178614522;178614521 | chr2:179479250;179479249;179479248 |
N2B | 7266 | 22021;22022;22023 | chr2:178614523;178614522;178614521 | chr2:179479250;179479249;179479248 |
Novex-1 | 7391 | 22396;22397;22398 | chr2:178614523;178614522;178614521 | chr2:179479250;179479249;179479248 |
Novex-2 | 7458 | 22597;22598;22599 | chr2:178614523;178614522;178614521 | chr2:179479250;179479249;179479248 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.939 | D | 0.735 | 0.426 | 0.629781192331 | gnomAD-4.0.0 | 2.73913E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59963E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9249 | likely_pathogenic | 0.9156 | pathogenic | -2.024 | Highly Destabilizing | 0.91 | D | 0.701 | prob.neutral | None | None | None | None | N |
I/C | 0.9787 | likely_pathogenic | 0.9793 | pathogenic | -1.302 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
I/D | 0.9999 | likely_pathogenic | 0.9998 | pathogenic | -1.864 | Destabilizing | 0.998 | D | 0.837 | deleterious | None | None | None | None | N |
I/E | 0.999 | likely_pathogenic | 0.999 | pathogenic | -1.707 | Destabilizing | 0.993 | D | 0.835 | deleterious | None | None | None | None | N |
I/F | 0.9218 | likely_pathogenic | 0.9305 | pathogenic | -1.237 | Destabilizing | 0.991 | D | 0.733 | prob.delet. | D | 0.561863686 | None | None | N |
I/G | 0.9967 | likely_pathogenic | 0.9964 | pathogenic | -2.513 | Highly Destabilizing | 0.993 | D | 0.835 | deleterious | None | None | None | None | N |
I/H | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -1.941 | Destabilizing | 0.999 | D | 0.816 | deleterious | None | None | None | None | N |
I/K | 0.9977 | likely_pathogenic | 0.9977 | pathogenic | -1.318 | Destabilizing | 0.993 | D | 0.837 | deleterious | None | None | None | None | N |
I/L | 0.2954 | likely_benign | 0.3082 | benign | -0.662 | Destabilizing | 0.58 | D | 0.454 | neutral | N | 0.446206612 | None | None | N |
I/M | 0.4403 | ambiguous | 0.4671 | ambiguous | -0.582 | Destabilizing | 0.991 | D | 0.695 | prob.neutral | N | 0.500651228 | None | None | N |
I/N | 0.9977 | likely_pathogenic | 0.9977 | pathogenic | -1.457 | Destabilizing | 0.997 | D | 0.834 | deleterious | D | 0.606363779 | None | None | N |
I/P | 0.9986 | likely_pathogenic | 0.9985 | pathogenic | -1.091 | Destabilizing | 0.998 | D | 0.832 | deleterious | None | None | None | None | N |
I/Q | 0.9979 | likely_pathogenic | 0.9979 | pathogenic | -1.415 | Destabilizing | 0.998 | D | 0.842 | deleterious | None | None | None | None | N |
I/R | 0.9964 | likely_pathogenic | 0.9963 | pathogenic | -1.017 | Destabilizing | 0.998 | D | 0.842 | deleterious | None | None | None | None | N |
I/S | 0.9903 | likely_pathogenic | 0.9897 | pathogenic | -2.176 | Highly Destabilizing | 0.991 | D | 0.806 | deleterious | D | 0.605433628 | None | None | N |
I/T | 0.9317 | likely_pathogenic | 0.9263 | pathogenic | -1.876 | Destabilizing | 0.939 | D | 0.735 | prob.delet. | D | 0.603908937 | None | None | N |
I/V | 0.1388 | likely_benign | 0.1459 | benign | -1.091 | Destabilizing | 0.02 | N | 0.285 | neutral | N | 0.437083429 | None | None | N |
I/W | 0.9992 | likely_pathogenic | 0.9994 | pathogenic | -1.543 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
I/Y | 0.9971 | likely_pathogenic | 0.9974 | pathogenic | -1.217 | Destabilizing | 0.998 | D | 0.734 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.