Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16336 | 49231;49232;49233 | chr2:178614508;178614507;178614506 | chr2:179479235;179479234;179479233 |
N2AB | 14695 | 44308;44309;44310 | chr2:178614508;178614507;178614506 | chr2:179479235;179479234;179479233 |
N2A | 13768 | 41527;41528;41529 | chr2:178614508;178614507;178614506 | chr2:179479235;179479234;179479233 |
N2B | 7271 | 22036;22037;22038 | chr2:178614508;178614507;178614506 | chr2:179479235;179479234;179479233 |
Novex-1 | 7396 | 22411;22412;22413 | chr2:178614508;178614507;178614506 | chr2:179479235;179479234;179479233 |
Novex-2 | 7463 | 22612;22613;22614 | chr2:178614508;178614507;178614506 | chr2:179479235;179479234;179479233 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.001 | N | 0.103 | 0.09 | 0.239305524855 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 1.26695E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/L | None | None | 0.017 | N | 0.251 | 0.063 | 0.208000267992 | gnomAD-4.0.0 | 1.5965E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43843E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1682 | likely_benign | 0.1343 | benign | -0.311 | Destabilizing | 0.001 | N | 0.103 | neutral | N | 0.461274251 | None | None | I |
V/C | 0.6547 | likely_pathogenic | 0.6433 | pathogenic | -0.749 | Destabilizing | 0.836 | D | 0.286 | neutral | None | None | None | None | I |
V/D | 0.4296 | ambiguous | 0.3183 | benign | -0.38 | Destabilizing | 0.418 | N | 0.33 | neutral | None | None | None | None | I |
V/E | 0.4044 | ambiguous | 0.3099 | benign | -0.503 | Destabilizing | 0.351 | N | 0.303 | neutral | N | 0.440480396 | None | None | I |
V/F | 0.2687 | likely_benign | 0.2519 | benign | -0.737 | Destabilizing | 0.716 | D | 0.313 | neutral | None | None | None | None | I |
V/G | 0.2149 | likely_benign | 0.1876 | benign | -0.363 | Destabilizing | 0.101 | N | 0.315 | neutral | N | 0.474184059 | None | None | I |
V/H | 0.5623 | ambiguous | 0.5074 | ambiguous | -0.014 | Destabilizing | 0.94 | D | 0.276 | neutral | None | None | None | None | I |
V/I | 0.0803 | likely_benign | 0.084 | benign | -0.319 | Destabilizing | 0.002 | N | 0.167 | neutral | None | None | None | None | I |
V/K | 0.3668 | ambiguous | 0.2603 | benign | -0.355 | Destabilizing | 0.418 | N | 0.305 | neutral | None | None | None | None | I |
V/L | 0.2597 | likely_benign | 0.2332 | benign | -0.319 | Destabilizing | 0.017 | N | 0.251 | neutral | N | 0.489479334 | None | None | I |
V/M | 0.1988 | likely_benign | 0.1957 | benign | -0.522 | Destabilizing | 0.655 | D | 0.221 | neutral | N | 0.49465076 | None | None | I |
V/N | 0.2322 | likely_benign | 0.1935 | benign | -0.137 | Destabilizing | 0.418 | N | 0.303 | neutral | None | None | None | None | I |
V/P | 0.4029 | ambiguous | 0.307 | benign | -0.289 | Destabilizing | 0.593 | D | 0.322 | neutral | None | None | None | None | I |
V/Q | 0.3557 | ambiguous | 0.2994 | benign | -0.362 | Destabilizing | 0.716 | D | 0.327 | neutral | None | None | None | None | I |
V/R | 0.3716 | ambiguous | 0.2635 | benign | 0.093 | Stabilizing | 0.418 | N | 0.288 | neutral | None | None | None | None | I |
V/S | 0.1609 | likely_benign | 0.1356 | benign | -0.429 | Destabilizing | 0.001 | N | 0.114 | neutral | None | None | None | None | I |
V/T | 0.1512 | likely_benign | 0.1317 | benign | -0.462 | Destabilizing | None | N | 0.092 | neutral | None | None | None | None | I |
V/W | 0.8935 | likely_pathogenic | 0.8925 | pathogenic | -0.797 | Destabilizing | 0.983 | D | 0.271 | neutral | None | None | None | None | I |
V/Y | 0.6176 | likely_pathogenic | 0.5717 | pathogenic | -0.515 | Destabilizing | 0.836 | D | 0.288 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.