Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16341 | 49246;49247;49248 | chr2:178614493;178614492;178614491 | chr2:179479220;179479219;179479218 |
N2AB | 14700 | 44323;44324;44325 | chr2:178614493;178614492;178614491 | chr2:179479220;179479219;179479218 |
N2A | 13773 | 41542;41543;41544 | chr2:178614493;178614492;178614491 | chr2:179479220;179479219;179479218 |
N2B | 7276 | 22051;22052;22053 | chr2:178614493;178614492;178614491 | chr2:179479220;179479219;179479218 |
Novex-1 | 7401 | 22426;22427;22428 | chr2:178614493;178614492;178614491 | chr2:179479220;179479219;179479218 |
Novex-2 | 7468 | 22627;22628;22629 | chr2:178614493;178614492;178614491 | chr2:179479220;179479219;179479218 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.999 | N | 0.519 | 0.322 | 0.410734915765 | gnomAD-4.0.0 | 1.60165E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87684E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2851 | likely_benign | 0.3838 | ambiguous | -0.261 | Destabilizing | 0.999 | D | 0.524 | neutral | D | 0.581465085 | None | None | I |
T/C | 0.8619 | likely_pathogenic | 0.9055 | pathogenic | -0.339 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
T/D | 0.9176 | likely_pathogenic | 0.9541 | pathogenic | 0.149 | Stabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
T/E | 0.8358 | likely_pathogenic | 0.9031 | pathogenic | 0.09 | Stabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
T/F | 0.8123 | likely_pathogenic | 0.8899 | pathogenic | -0.674 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
T/G | 0.7625 | likely_pathogenic | 0.8245 | pathogenic | -0.413 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
T/H | 0.7616 | likely_pathogenic | 0.8579 | pathogenic | -0.655 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
T/I | 0.6922 | likely_pathogenic | 0.8108 | pathogenic | 0.02 | Stabilizing | 1.0 | D | 0.855 | deleterious | D | 0.549507558 | None | None | I |
T/K | 0.6732 | likely_pathogenic | 0.7887 | pathogenic | -0.417 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
T/L | 0.4845 | ambiguous | 0.6 | pathogenic | 0.02 | Stabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | I |
T/M | 0.252 | likely_benign | 0.39 | ambiguous | -0.024 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
T/N | 0.5388 | ambiguous | 0.6726 | pathogenic | -0.233 | Destabilizing | 1.0 | D | 0.749 | deleterious | N | 0.517704472 | None | None | I |
T/P | 0.8639 | likely_pathogenic | 0.875 | pathogenic | -0.044 | Destabilizing | 1.0 | D | 0.848 | deleterious | D | 0.671119165 | None | None | I |
T/Q | 0.6521 | likely_pathogenic | 0.7722 | pathogenic | -0.405 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | I |
T/R | 0.669 | likely_pathogenic | 0.7907 | pathogenic | -0.157 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
T/S | 0.3141 | likely_benign | 0.4313 | ambiguous | -0.42 | Destabilizing | 0.999 | D | 0.519 | neutral | N | 0.479635431 | None | None | I |
T/V | 0.443 | ambiguous | 0.5492 | ambiguous | -0.044 | Destabilizing | 0.999 | D | 0.594 | neutral | None | None | None | None | I |
T/W | 0.9517 | likely_pathogenic | 0.9744 | pathogenic | -0.719 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
T/Y | 0.8441 | likely_pathogenic | 0.9049 | pathogenic | -0.425 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.