Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16343 | 49252;49253;49254 | chr2:178614487;178614486;178614485 | chr2:179479214;179479213;179479212 |
N2AB | 14702 | 44329;44330;44331 | chr2:178614487;178614486;178614485 | chr2:179479214;179479213;179479212 |
N2A | 13775 | 41548;41549;41550 | chr2:178614487;178614486;178614485 | chr2:179479214;179479213;179479212 |
N2B | 7278 | 22057;22058;22059 | chr2:178614487;178614486;178614485 | chr2:179479214;179479213;179479212 |
Novex-1 | 7403 | 22432;22433;22434 | chr2:178614487;178614486;178614485 | chr2:179479214;179479213;179479212 |
Novex-2 | 7470 | 22633;22634;22635 | chr2:178614487;178614486;178614485 | chr2:179479214;179479213;179479212 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs2056942530 | None | 0.667 | N | 0.586 | 0.165 | 0.619546946635 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3731 | ambiguous | 0.3961 | ambiguous | -0.62 | Destabilizing | 0.055 | N | 0.456 | neutral | N | 0.472578396 | None | None | I |
V/C | 0.8709 | likely_pathogenic | 0.8806 | pathogenic | -0.739 | Destabilizing | 0.909 | D | 0.655 | neutral | None | None | None | None | I |
V/D | 0.8537 | likely_pathogenic | 0.8845 | pathogenic | -0.447 | Destabilizing | 0.567 | D | 0.712 | prob.delet. | None | None | None | None | I |
V/E | 0.6791 | likely_pathogenic | 0.7495 | pathogenic | -0.542 | Destabilizing | 0.497 | N | 0.712 | prob.delet. | N | 0.45181701 | None | None | I |
V/F | 0.4441 | ambiguous | 0.4903 | ambiguous | -0.699 | Destabilizing | 0.726 | D | 0.677 | prob.neutral | None | None | None | None | I |
V/G | 0.6577 | likely_pathogenic | 0.68 | pathogenic | -0.785 | Destabilizing | 0.22 | N | 0.712 | prob.delet. | D | 0.596752704 | None | None | I |
V/H | 0.8784 | likely_pathogenic | 0.9093 | pathogenic | -0.31 | Destabilizing | 0.968 | D | 0.747 | deleterious | None | None | None | None | I |
V/I | 0.1175 | likely_benign | 0.1247 | benign | -0.325 | Destabilizing | 0.072 | N | 0.443 | neutral | None | None | None | None | I |
V/K | 0.7253 | likely_pathogenic | 0.807 | pathogenic | -0.645 | Destabilizing | 0.567 | D | 0.713 | prob.delet. | None | None | None | None | I |
V/L | 0.4817 | ambiguous | 0.5274 | ambiguous | -0.325 | Destabilizing | 0.055 | N | 0.463 | neutral | N | 0.509458945 | None | None | I |
V/M | 0.2546 | likely_benign | 0.2983 | benign | -0.41 | Destabilizing | 0.667 | D | 0.586 | neutral | N | 0.510943125 | None | None | I |
V/N | 0.6585 | likely_pathogenic | 0.6992 | pathogenic | -0.423 | Destabilizing | 0.567 | D | 0.716 | prob.delet. | None | None | None | None | I |
V/P | 0.9346 | likely_pathogenic | 0.9361 | pathogenic | -0.387 | Destabilizing | 0.726 | D | 0.725 | prob.delet. | None | None | None | None | I |
V/Q | 0.6771 | likely_pathogenic | 0.7424 | pathogenic | -0.652 | Destabilizing | 0.726 | D | 0.748 | deleterious | None | None | None | None | I |
V/R | 0.7194 | likely_pathogenic | 0.7894 | pathogenic | -0.104 | Destabilizing | 0.567 | D | 0.751 | deleterious | None | None | None | None | I |
V/S | 0.4907 | ambiguous | 0.5261 | ambiguous | -0.796 | Destabilizing | 0.157 | N | 0.648 | neutral | None | None | None | None | I |
V/T | 0.2128 | likely_benign | 0.2367 | benign | -0.789 | Destabilizing | None | N | 0.21 | neutral | None | None | None | None | I |
V/W | 0.9621 | likely_pathogenic | 0.9675 | pathogenic | -0.791 | Destabilizing | 0.968 | D | 0.767 | deleterious | None | None | None | None | I |
V/Y | 0.8608 | likely_pathogenic | 0.876 | pathogenic | -0.502 | Destabilizing | 0.726 | D | 0.666 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.