Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1635 | 5128;5129;5130 | chr2:178776961;178776960;178776959 | chr2:179641688;179641687;179641686 |
N2AB | 1635 | 5128;5129;5130 | chr2:178776961;178776960;178776959 | chr2:179641688;179641687;179641686 |
N2A | 1635 | 5128;5129;5130 | chr2:178776961;178776960;178776959 | chr2:179641688;179641687;179641686 |
N2B | 1589 | 4990;4991;4992 | chr2:178776961;178776960;178776959 | chr2:179641688;179641687;179641686 |
Novex-1 | 1589 | 4990;4991;4992 | chr2:178776961;178776960;178776959 | chr2:179641688;179641687;179641686 |
Novex-2 | 1589 | 4990;4991;4992 | chr2:178776961;178776960;178776959 | chr2:179641688;179641687;179641686 |
Novex-3 | 1635 | 5128;5129;5130 | chr2:178776961;178776960;178776959 | chr2:179641688;179641687;179641686 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs776274777 | 0.016 | 0.999 | N | 0.598 | 0.475 | 0.38225645794 | gnomAD-2.1.1 | 7.99E-06 | None | None | None | None | I | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs776274777 | 0.016 | 0.999 | N | 0.598 | 0.475 | 0.38225645794 | gnomAD-4.0.0 | 3.18202E-06 | None | None | None | None | I | None | 0 | 4.57561E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.824 | likely_pathogenic | 0.7217 | pathogenic | 0.022 | Stabilizing | 0.999 | D | 0.591 | neutral | None | None | None | None | I |
K/C | 0.973 | likely_pathogenic | 0.9487 | pathogenic | -0.369 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
K/D | 0.9579 | likely_pathogenic | 0.9228 | pathogenic | -0.287 | Destabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | I |
K/E | 0.721 | likely_pathogenic | 0.5903 | pathogenic | -0.303 | Destabilizing | 0.999 | D | 0.598 | neutral | N | 0.495801937 | None | None | I |
K/F | 0.9869 | likely_pathogenic | 0.972 | pathogenic | -0.334 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | I |
K/G | 0.909 | likely_pathogenic | 0.8361 | pathogenic | -0.105 | Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | I |
K/H | 0.7524 | likely_pathogenic | 0.6574 | pathogenic | -0.253 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | I |
K/I | 0.8682 | likely_pathogenic | 0.7714 | pathogenic | 0.271 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | N | 0.513423985 | None | None | I |
K/L | 0.8463 | likely_pathogenic | 0.7481 | pathogenic | 0.271 | Stabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | I |
K/M | 0.7635 | likely_pathogenic | 0.6412 | pathogenic | -0.033 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
K/N | 0.917 | likely_pathogenic | 0.8485 | pathogenic | 0.073 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.509757673 | None | None | I |
K/P | 0.9229 | likely_pathogenic | 0.8561 | pathogenic | 0.212 | Stabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | I |
K/Q | 0.4526 | ambiguous | 0.3429 | ambiguous | -0.081 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | D | 0.559921488 | None | None | I |
K/R | 0.1266 | likely_benign | 0.1109 | benign | -0.094 | Destabilizing | 0.999 | D | 0.542 | neutral | N | 0.502297159 | None | None | I |
K/S | 0.8906 | likely_pathogenic | 0.8104 | pathogenic | -0.288 | Destabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | I |
K/T | 0.6794 | likely_pathogenic | 0.5411 | ambiguous | -0.188 | Destabilizing | 1.0 | D | 0.621 | neutral | N | 0.512818854 | None | None | I |
K/V | 0.8132 | likely_pathogenic | 0.7112 | pathogenic | 0.212 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
K/W | 0.9828 | likely_pathogenic | 0.9666 | pathogenic | -0.436 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | I |
K/Y | 0.9609 | likely_pathogenic | 0.9287 | pathogenic | -0.079 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.