Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1636 | 5131;5132;5133 | chr2:178776958;178776957;178776956 | chr2:179641685;179641684;179641683 |
N2AB | 1636 | 5131;5132;5133 | chr2:178776958;178776957;178776956 | chr2:179641685;179641684;179641683 |
N2A | 1636 | 5131;5132;5133 | chr2:178776958;178776957;178776956 | chr2:179641685;179641684;179641683 |
N2B | 1590 | 4993;4994;4995 | chr2:178776958;178776957;178776956 | chr2:179641685;179641684;179641683 |
Novex-1 | 1590 | 4993;4994;4995 | chr2:178776958;178776957;178776956 | chr2:179641685;179641684;179641683 |
Novex-2 | 1590 | 4993;4994;4995 | chr2:178776958;178776957;178776956 | chr2:179641685;179641684;179641683 |
Novex-3 | 1636 | 5131;5132;5133 | chr2:178776958;178776957;178776956 | chr2:179641685;179641684;179641683 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 1.0 | N | 0.678 | 0.417 | 0.52730433808 | gnomAD-4.0.0 | 1.59102E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43336E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7987 | likely_pathogenic | 0.7594 | pathogenic | -0.862 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
A/D | 0.8896 | likely_pathogenic | 0.862 | pathogenic | -0.663 | Destabilizing | 1.0 | D | 0.807 | deleterious | D | 0.675499371 | None | None | I |
A/E | 0.8276 | likely_pathogenic | 0.7992 | pathogenic | -0.821 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
A/F | 0.5413 | ambiguous | 0.4721 | ambiguous | -0.952 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | I |
A/G | 0.4639 | ambiguous | 0.4134 | ambiguous | -0.324 | Destabilizing | 1.0 | D | 0.601 | neutral | D | 0.608593526 | None | None | I |
A/H | 0.8128 | likely_pathogenic | 0.7851 | pathogenic | -0.303 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
A/I | 0.6444 | likely_pathogenic | 0.525 | ambiguous | -0.433 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | I |
A/K | 0.9483 | likely_pathogenic | 0.9386 | pathogenic | -0.7 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
A/L | 0.5572 | ambiguous | 0.4852 | ambiguous | -0.433 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
A/M | 0.5681 | likely_pathogenic | 0.4714 | ambiguous | -0.525 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
A/N | 0.736 | likely_pathogenic | 0.6834 | pathogenic | -0.398 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | I |
A/P | 0.9807 | likely_pathogenic | 0.9754 | pathogenic | -0.359 | Destabilizing | 1.0 | D | 0.757 | deleterious | D | 0.714275109 | None | None | I |
A/Q | 0.8022 | likely_pathogenic | 0.764 | pathogenic | -0.691 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | I |
A/R | 0.893 | likely_pathogenic | 0.8843 | pathogenic | -0.194 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
A/S | 0.205 | likely_benign | 0.1786 | benign | -0.565 | Destabilizing | 1.0 | D | 0.63 | neutral | D | 0.577167243 | None | None | I |
A/T | 0.3947 | ambiguous | 0.3172 | benign | -0.65 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | D | 0.617041921 | None | None | I |
A/V | 0.3046 | likely_benign | 0.2377 | benign | -0.359 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | N | 0.508374447 | None | None | I |
A/W | 0.9442 | likely_pathogenic | 0.9332 | pathogenic | -1.062 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
A/Y | 0.7637 | likely_pathogenic | 0.7238 | pathogenic | -0.74 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.