Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16360 | 49303;49304;49305 | chr2:178614319;178614318;178614317 | chr2:179479046;179479045;179479044 |
N2AB | 14719 | 44380;44381;44382 | chr2:178614319;178614318;178614317 | chr2:179479046;179479045;179479044 |
N2A | 13792 | 41599;41600;41601 | chr2:178614319;178614318;178614317 | chr2:179479046;179479045;179479044 |
N2B | 7295 | 22108;22109;22110 | chr2:178614319;178614318;178614317 | chr2:179479046;179479045;179479044 |
Novex-1 | 7420 | 22483;22484;22485 | chr2:178614319;178614318;178614317 | chr2:179479046;179479045;179479044 |
Novex-2 | 7487 | 22684;22685;22686 | chr2:178614319;178614318;178614317 | chr2:179479046;179479045;179479044 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.638 | N | 0.667 | 0.216 | 0.542187413537 | gnomAD-4.0.0 | 6.84612E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16017E-05 | 0 |
I/L | None | None | 0.043 | N | 0.442 | 0.101 | 0.44750879378 | gnomAD-4.0.0 | 6.84612E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99823E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6508 | likely_pathogenic | 0.7362 | pathogenic | -2.258 | Highly Destabilizing | 0.25 | N | 0.611 | neutral | None | None | None | None | N |
I/C | 0.7542 | likely_pathogenic | 0.8144 | pathogenic | -1.627 | Destabilizing | 0.947 | D | 0.74 | deleterious | None | None | None | None | N |
I/D | 0.9813 | likely_pathogenic | 0.9892 | pathogenic | -1.928 | Destabilizing | 0.826 | D | 0.856 | deleterious | None | None | None | None | N |
I/E | 0.9631 | likely_pathogenic | 0.9759 | pathogenic | -1.707 | Destabilizing | 0.826 | D | 0.843 | deleterious | None | None | None | None | N |
I/F | 0.3366 | likely_benign | 0.4411 | ambiguous | -1.348 | Destabilizing | 0.638 | D | 0.667 | neutral | N | 0.476761009 | None | None | N |
I/G | 0.9376 | likely_pathogenic | 0.9628 | pathogenic | -2.805 | Highly Destabilizing | 0.826 | D | 0.833 | deleterious | None | None | None | None | N |
I/H | 0.9213 | likely_pathogenic | 0.9574 | pathogenic | -2.159 | Highly Destabilizing | 0.982 | D | 0.829 | deleterious | None | None | None | None | N |
I/K | 0.9152 | likely_pathogenic | 0.9356 | pathogenic | -1.56 | Destabilizing | 0.826 | D | 0.843 | deleterious | None | None | None | None | N |
I/L | 0.2549 | likely_benign | 0.2994 | benign | -0.696 | Destabilizing | 0.043 | N | 0.442 | neutral | N | 0.480578566 | None | None | N |
I/M | 0.2085 | likely_benign | 0.237 | benign | -0.699 | Destabilizing | 0.638 | D | 0.645 | neutral | D | 0.593565552 | None | None | N |
I/N | 0.8218 | likely_pathogenic | 0.8709 | pathogenic | -1.83 | Destabilizing | 0.916 | D | 0.855 | deleterious | D | 0.564742618 | None | None | N |
I/P | 0.9362 | likely_pathogenic | 0.9562 | pathogenic | -1.195 | Destabilizing | 0.826 | D | 0.858 | deleterious | None | None | None | None | N |
I/Q | 0.9206 | likely_pathogenic | 0.945 | pathogenic | -1.67 | Destabilizing | 0.935 | D | 0.857 | deleterious | None | None | None | None | N |
I/R | 0.8762 | likely_pathogenic | 0.9106 | pathogenic | -1.379 | Destabilizing | 0.826 | D | 0.859 | deleterious | None | None | None | None | N |
I/S | 0.748 | likely_pathogenic | 0.8154 | pathogenic | -2.632 | Highly Destabilizing | 0.638 | D | 0.787 | deleterious | D | 0.584426469 | None | None | N |
I/T | 0.5958 | likely_pathogenic | 0.6991 | pathogenic | -2.244 | Highly Destabilizing | 0.201 | N | 0.755 | deleterious | D | 0.564096574 | None | None | N |
I/V | 0.0721 | likely_benign | 0.084 | benign | -1.195 | Destabilizing | 0.001 | N | 0.216 | neutral | N | 0.428111879 | None | None | N |
I/W | 0.9491 | likely_pathogenic | 0.9729 | pathogenic | -1.611 | Destabilizing | 0.982 | D | 0.78 | deleterious | None | None | None | None | N |
I/Y | 0.8306 | likely_pathogenic | 0.8868 | pathogenic | -1.314 | Destabilizing | 0.826 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.