Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16365 | 49318;49319;49320 | chr2:178614304;178614303;178614302 | chr2:179479031;179479030;179479029 |
N2AB | 14724 | 44395;44396;44397 | chr2:178614304;178614303;178614302 | chr2:179479031;179479030;179479029 |
N2A | 13797 | 41614;41615;41616 | chr2:178614304;178614303;178614302 | chr2:179479031;179479030;179479029 |
N2B | 7300 | 22123;22124;22125 | chr2:178614304;178614303;178614302 | chr2:179479031;179479030;179479029 |
Novex-1 | 7425 | 22498;22499;22500 | chr2:178614304;178614303;178614302 | chr2:179479031;179479030;179479029 |
Novex-2 | 7492 | 22699;22700;22701 | chr2:178614304;178614303;178614302 | chr2:179479031;179479030;179479029 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1424335711 | None | 0.004 | N | 0.309 | 0.093 | 0.0482279557977 | gnomAD-4.0.0 | 6.84568E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99792E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1679 | likely_benign | 0.1468 | benign | -1.051 | Destabilizing | 0.48 | N | 0.545 | neutral | None | None | None | None | N |
N/C | 0.2237 | likely_benign | 0.2087 | benign | -0.315 | Destabilizing | 0.98 | D | 0.794 | deleterious | None | None | None | None | N |
N/D | 0.2297 | likely_benign | 0.2191 | benign | -1.188 | Destabilizing | 0.41 | N | 0.457 | neutral | N | 0.459051485 | None | None | N |
N/E | 0.4976 | ambiguous | 0.4573 | ambiguous | -1.108 | Destabilizing | 0.48 | N | 0.547 | neutral | None | None | None | None | N |
N/F | 0.6543 | likely_pathogenic | 0.611 | pathogenic | -0.975 | Destabilizing | 0.929 | D | 0.789 | deleterious | None | None | None | None | N |
N/G | 0.2681 | likely_benign | 0.2462 | benign | -1.35 | Destabilizing | 0.48 | N | 0.461 | neutral | None | None | None | None | N |
N/H | 0.1408 | likely_benign | 0.1357 | benign | -1.082 | Destabilizing | 0.908 | D | 0.731 | prob.delet. | N | 0.48060892 | None | None | N |
N/I | 0.3258 | likely_benign | 0.3068 | benign | -0.3 | Destabilizing | 0.83 | D | 0.78 | deleterious | D | 0.546121443 | None | None | N |
N/K | 0.4076 | ambiguous | 0.3656 | ambiguous | -0.38 | Destabilizing | 0.41 | N | 0.557 | neutral | N | 0.392729822 | None | None | N |
N/L | 0.3217 | likely_benign | 0.2943 | benign | -0.3 | Destabilizing | 0.866 | D | 0.709 | prob.delet. | None | None | None | None | N |
N/M | 0.3772 | ambiguous | 0.3515 | ambiguous | 0.283 | Stabilizing | 0.993 | D | 0.752 | deleterious | None | None | None | None | N |
N/P | 0.333 | likely_benign | 0.3186 | benign | -0.523 | Destabilizing | 0.866 | D | 0.743 | deleterious | None | None | None | None | N |
N/Q | 0.3689 | ambiguous | 0.3389 | benign | -1.213 | Destabilizing | 0.866 | D | 0.713 | prob.delet. | None | None | None | None | N |
N/R | 0.4048 | ambiguous | 0.3649 | ambiguous | -0.242 | Destabilizing | 0.866 | D | 0.707 | prob.neutral | None | None | None | None | N |
N/S | 0.0641 | likely_benign | 0.0593 | benign | -1.057 | Destabilizing | 0.004 | N | 0.309 | neutral | N | 0.428945269 | None | None | N |
N/T | 0.1574 | likely_benign | 0.1414 | benign | -0.801 | Destabilizing | 0.41 | N | 0.487 | neutral | N | 0.478909054 | None | None | N |
N/V | 0.2653 | likely_benign | 0.2445 | benign | -0.523 | Destabilizing | 0.866 | D | 0.747 | deleterious | None | None | None | None | N |
N/W | 0.8026 | likely_pathogenic | 0.7896 | pathogenic | -0.713 | Destabilizing | 0.993 | D | 0.817 | deleterious | None | None | None | None | N |
N/Y | 0.2481 | likely_benign | 0.2232 | benign | -0.489 | Destabilizing | 0.908 | D | 0.776 | deleterious | D | 0.585944444 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.