Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16366 | 49321;49322;49323 | chr2:178614301;178614300;178614299 | chr2:179479028;179479027;179479026 |
N2AB | 14725 | 44398;44399;44400 | chr2:178614301;178614300;178614299 | chr2:179479028;179479027;179479026 |
N2A | 13798 | 41617;41618;41619 | chr2:178614301;178614300;178614299 | chr2:179479028;179479027;179479026 |
N2B | 7301 | 22126;22127;22128 | chr2:178614301;178614300;178614299 | chr2:179479028;179479027;179479026 |
Novex-1 | 7426 | 22501;22502;22503 | chr2:178614301;178614300;178614299 | chr2:179479028;179479027;179479026 |
Novex-2 | 7493 | 22702;22703;22704 | chr2:178614301;178614300;178614299 | chr2:179479028;179479027;179479026 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.885 | N | 0.479 | 0.264 | 0.35139820857 | gnomAD-4.0.0 | 5.47649E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49894E-06 | 0 | 4.97413E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3843 | ambiguous | 0.3292 | benign | -0.761 | Destabilizing | 0.885 | D | 0.479 | neutral | N | 0.468932288 | None | None | N |
E/C | 0.9455 | likely_pathogenic | 0.9236 | pathogenic | -0.182 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
E/D | 0.1544 | likely_benign | 0.1306 | benign | -0.794 | Destabilizing | 0.046 | N | 0.239 | neutral | N | 0.42543548 | None | None | N |
E/F | 0.9231 | likely_pathogenic | 0.901 | pathogenic | -0.633 | Destabilizing | 0.986 | D | 0.632 | neutral | None | None | None | None | N |
E/G | 0.4557 | ambiguous | 0.3737 | ambiguous | -1.034 | Destabilizing | 0.969 | D | 0.487 | neutral | N | 0.475485756 | None | None | N |
E/H | 0.7445 | likely_pathogenic | 0.6816 | pathogenic | -0.83 | Destabilizing | 0.999 | D | 0.496 | neutral | None | None | None | None | N |
E/I | 0.6528 | likely_pathogenic | 0.6035 | pathogenic | -0.049 | Destabilizing | 0.973 | D | 0.554 | neutral | None | None | None | None | N |
E/K | 0.3313 | likely_benign | 0.3008 | benign | -0.234 | Destabilizing | 0.969 | D | 0.558 | neutral | N | 0.480816827 | None | None | N |
E/L | 0.6986 | likely_pathogenic | 0.6363 | pathogenic | -0.049 | Destabilizing | 0.91 | D | 0.543 | neutral | None | None | None | None | N |
E/M | 0.7078 | likely_pathogenic | 0.6529 | pathogenic | 0.398 | Stabilizing | 0.998 | D | 0.563 | neutral | None | None | None | None | N |
E/N | 0.4143 | ambiguous | 0.3348 | benign | -0.546 | Destabilizing | 0.986 | D | 0.515 | neutral | None | None | None | None | N |
E/P | 0.992 | likely_pathogenic | 0.9867 | pathogenic | -0.266 | Destabilizing | 0.998 | D | 0.518 | neutral | None | None | None | None | N |
E/Q | 0.2674 | likely_benign | 0.2352 | benign | -0.494 | Destabilizing | 0.991 | D | 0.547 | neutral | N | 0.477730807 | None | None | N |
E/R | 0.5807 | likely_pathogenic | 0.5236 | ambiguous | -0.093 | Destabilizing | 0.993 | D | 0.522 | neutral | None | None | None | None | N |
E/S | 0.4019 | ambiguous | 0.3444 | ambiguous | -0.777 | Destabilizing | 0.953 | D | 0.533 | neutral | None | None | None | None | N |
E/T | 0.3421 | ambiguous | 0.2898 | benign | -0.559 | Destabilizing | 0.953 | D | 0.485 | neutral | None | None | None | None | N |
E/V | 0.4583 | ambiguous | 0.408 | ambiguous | -0.266 | Destabilizing | 0.1 | N | 0.349 | neutral | D | 0.569572604 | None | None | N |
E/W | 0.9801 | likely_pathogenic | 0.9692 | pathogenic | -0.466 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/Y | 0.8362 | likely_pathogenic | 0.7849 | pathogenic | -0.401 | Destabilizing | 0.993 | D | 0.593 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.