Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16367 | 49324;49325;49326 | chr2:178614298;178614297;178614296 | chr2:179479025;179479024;179479023 |
N2AB | 14726 | 44401;44402;44403 | chr2:178614298;178614297;178614296 | chr2:179479025;179479024;179479023 |
N2A | 13799 | 41620;41621;41622 | chr2:178614298;178614297;178614296 | chr2:179479025;179479024;179479023 |
N2B | 7302 | 22129;22130;22131 | chr2:178614298;178614297;178614296 | chr2:179479025;179479024;179479023 |
Novex-1 | 7427 | 22504;22505;22506 | chr2:178614298;178614297;178614296 | chr2:179479025;179479024;179479023 |
Novex-2 | 7494 | 22705;22706;22707 | chr2:178614298;178614297;178614296 | chr2:179479025;179479024;179479023 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.989 | D | 0.665 | 0.513 | 0.829753570234 | gnomAD-4.0.0 | 3.18638E-06 | None | None | None | None | N | None | 0 | 4.57875E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1489 | likely_benign | 0.158 | benign | -0.228 | Destabilizing | 0.973 | D | 0.428 | neutral | D | 0.526997544 | None | None | N |
S/C | 0.1468 | likely_benign | 0.1574 | benign | -0.601 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
S/D | 0.751 | likely_pathogenic | 0.7771 | pathogenic | -1.825 | Destabilizing | 0.996 | D | 0.505 | neutral | None | None | None | None | N |
S/E | 0.7941 | likely_pathogenic | 0.798 | pathogenic | -1.799 | Destabilizing | 0.996 | D | 0.508 | neutral | None | None | None | None | N |
S/F | 0.2207 | likely_benign | 0.2133 | benign | -0.644 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
S/G | 0.172 | likely_benign | 0.1815 | benign | -0.454 | Destabilizing | 0.996 | D | 0.435 | neutral | None | None | None | None | N |
S/H | 0.4428 | ambiguous | 0.4223 | ambiguous | -1.084 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
S/I | 0.4545 | ambiguous | 0.4713 | ambiguous | 0.265 | Stabilizing | 0.998 | D | 0.814 | deleterious | None | None | None | None | N |
S/K | 0.92 | likely_pathogenic | 0.9209 | pathogenic | -0.644 | Destabilizing | 0.996 | D | 0.501 | neutral | None | None | None | None | N |
S/L | 0.233 | likely_benign | 0.2362 | benign | 0.265 | Stabilizing | 0.989 | D | 0.665 | neutral | D | 0.70403064 | None | None | N |
S/M | 0.268 | likely_benign | 0.261 | benign | 0.548 | Stabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
S/N | 0.2473 | likely_benign | 0.258 | benign | -1.057 | Destabilizing | 0.996 | D | 0.517 | neutral | None | None | None | None | N |
S/P | 0.9945 | likely_pathogenic | 0.9952 | pathogenic | 0.133 | Stabilizing | 0.999 | D | 0.762 | deleterious | D | 0.775195198 | None | None | N |
S/Q | 0.7423 | likely_pathogenic | 0.7215 | pathogenic | -1.276 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
S/R | 0.8865 | likely_pathogenic | 0.8918 | pathogenic | -0.491 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
S/T | 0.1089 | likely_benign | 0.1111 | benign | -0.747 | Destabilizing | 0.543 | D | 0.355 | neutral | N | 0.492684732 | None | None | N |
S/V | 0.4198 | ambiguous | 0.4261 | ambiguous | 0.133 | Stabilizing | 0.998 | D | 0.729 | prob.delet. | None | None | None | None | N |
S/W | 0.4843 | ambiguous | 0.4724 | ambiguous | -0.839 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
S/Y | 0.1994 | likely_benign | 0.1959 | benign | -0.408 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.