Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16369 | 49330;49331;49332 | chr2:178614292;178614291;178614290 | chr2:179479019;179479018;179479017 |
N2AB | 14728 | 44407;44408;44409 | chr2:178614292;178614291;178614290 | chr2:179479019;179479018;179479017 |
N2A | 13801 | 41626;41627;41628 | chr2:178614292;178614291;178614290 | chr2:179479019;179479018;179479017 |
N2B | 7304 | 22135;22136;22137 | chr2:178614292;178614291;178614290 | chr2:179479019;179479018;179479017 |
Novex-1 | 7429 | 22510;22511;22512 | chr2:178614292;178614291;178614290 | chr2:179479019;179479018;179479017 |
Novex-2 | 7496 | 22711;22712;22713 | chr2:178614292;178614291;178614290 | chr2:179479019;179479018;179479017 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.027 | N | 0.439 | 0.038 | 0.130388298395 | gnomAD-4.0.0 | 1.59318E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86144E-06 | 0 | 0 |
L/P | None | None | 0.741 | N | 0.609 | 0.305 | 0.735914652579 | gnomAD-4.0.0 | 1.59316E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86146E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2007 | likely_benign | 0.2035 | benign | -2.019 | Highly Destabilizing | 0.035 | N | 0.463 | neutral | None | None | None | None | N |
L/C | 0.2904 | likely_benign | 0.2947 | benign | -1.351 | Destabilizing | 0.935 | D | 0.54 | neutral | None | None | None | None | N |
L/D | 0.5799 | likely_pathogenic | 0.6067 | pathogenic | -1.973 | Destabilizing | 0.38 | N | 0.605 | neutral | None | None | None | None | N |
L/E | 0.315 | likely_benign | 0.353 | ambiguous | -1.96 | Destabilizing | 0.38 | N | 0.594 | neutral | None | None | None | None | N |
L/F | 0.0828 | likely_benign | 0.0842 | benign | -1.55 | Destabilizing | None | N | 0.193 | neutral | N | 0.460188225 | None | None | N |
L/G | 0.496 | ambiguous | 0.513 | ambiguous | -2.355 | Highly Destabilizing | 0.149 | N | 0.588 | neutral | None | None | None | None | N |
L/H | 0.1135 | likely_benign | 0.1155 | benign | -1.547 | Destabilizing | 0.001 | N | 0.447 | neutral | N | 0.460846631 | None | None | N |
L/I | 0.0702 | likely_benign | 0.0723 | benign | -1.145 | Destabilizing | 0.027 | N | 0.439 | neutral | N | 0.419761871 | None | None | N |
L/K | 0.2159 | likely_benign | 0.2153 | benign | -1.379 | Destabilizing | 0.38 | N | 0.585 | neutral | None | None | None | None | N |
L/M | 0.0905 | likely_benign | 0.0937 | benign | -0.872 | Destabilizing | 0.005 | N | 0.307 | neutral | None | None | None | None | N |
L/N | 0.2229 | likely_benign | 0.2305 | benign | -1.272 | Destabilizing | 0.38 | N | 0.607 | neutral | None | None | None | None | N |
L/P | 0.9319 | likely_pathogenic | 0.938 | pathogenic | -1.409 | Destabilizing | 0.741 | D | 0.609 | neutral | N | 0.481150404 | None | None | N |
L/Q | 0.1055 | likely_benign | 0.1126 | benign | -1.502 | Destabilizing | 0.38 | N | 0.599 | neutral | None | None | None | None | N |
L/R | 0.1592 | likely_benign | 0.1531 | benign | -0.731 | Destabilizing | 0.317 | N | 0.598 | neutral | N | 0.447971546 | None | None | N |
L/S | 0.1653 | likely_benign | 0.1727 | benign | -1.871 | Destabilizing | 0.149 | N | 0.527 | neutral | None | None | None | None | N |
L/T | 0.1192 | likely_benign | 0.1271 | benign | -1.747 | Destabilizing | 0.149 | N | 0.475 | neutral | None | None | None | None | N |
L/V | 0.07 | likely_benign | 0.0715 | benign | -1.409 | Destabilizing | None | N | 0.203 | neutral | N | 0.368085875 | None | None | N |
L/W | 0.2062 | likely_benign | 0.2095 | benign | -1.643 | Destabilizing | 0.824 | D | 0.615 | neutral | None | None | None | None | N |
L/Y | 0.206 | likely_benign | 0.203 | benign | -1.417 | Destabilizing | 0.081 | N | 0.488 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.