Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1637 | 5134;5135;5136 | chr2:178776955;178776954;178776953 | chr2:179641682;179641681;179641680 |
N2AB | 1637 | 5134;5135;5136 | chr2:178776955;178776954;178776953 | chr2:179641682;179641681;179641680 |
N2A | 1637 | 5134;5135;5136 | chr2:178776955;178776954;178776953 | chr2:179641682;179641681;179641680 |
N2B | 1591 | 4996;4997;4998 | chr2:178776955;178776954;178776953 | chr2:179641682;179641681;179641680 |
Novex-1 | 1591 | 4996;4997;4998 | chr2:178776955;178776954;178776953 | chr2:179641682;179641681;179641680 |
Novex-2 | 1591 | 4996;4997;4998 | chr2:178776955;178776954;178776953 | chr2:179641682;179641681;179641680 |
Novex-3 | 1637 | 5134;5135;5136 | chr2:178776955;178776954;178776953 | chr2:179641682;179641681;179641680 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | None | None | 1.0 | D | 0.856 | 0.894 | 0.591791014774 | gnomAD-4.0.0 | 1.36836E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31976E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.9251 | likely_pathogenic | 0.8865 | pathogenic | -0.423 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | D | 0.678558011 | None | None | I |
G/C | 0.9809 | likely_pathogenic | 0.9691 | pathogenic | -0.948 | Destabilizing | 1.0 | D | 0.812 | deleterious | D | 0.768400244 | None | None | I |
G/D | 0.9915 | likely_pathogenic | 0.9876 | pathogenic | -1.031 | Destabilizing | 1.0 | D | 0.856 | deleterious | D | 0.75489671 | None | None | I |
G/E | 0.9928 | likely_pathogenic | 0.9899 | pathogenic | -1.194 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
G/F | 0.9958 | likely_pathogenic | 0.9942 | pathogenic | -1.13 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
G/H | 0.9966 | likely_pathogenic | 0.9942 | pathogenic | -0.673 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
G/I | 0.9974 | likely_pathogenic | 0.9957 | pathogenic | -0.553 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
G/K | 0.9971 | likely_pathogenic | 0.9954 | pathogenic | -1.116 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
G/L | 0.9951 | likely_pathogenic | 0.9914 | pathogenic | -0.553 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
G/M | 0.9968 | likely_pathogenic | 0.9944 | pathogenic | -0.562 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
G/N | 0.9908 | likely_pathogenic | 0.9851 | pathogenic | -0.734 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | I |
G/P | 0.9997 | likely_pathogenic | 0.9995 | pathogenic | -0.477 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
G/Q | 0.9912 | likely_pathogenic | 0.9871 | pathogenic | -1.053 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | I |
G/R | 0.9905 | likely_pathogenic | 0.9852 | pathogenic | -0.571 | Destabilizing | 1.0 | D | 0.871 | deleterious | D | 0.806348774 | None | None | I |
G/S | 0.8779 | likely_pathogenic | 0.8242 | pathogenic | -0.815 | Destabilizing | 1.0 | D | 0.794 | deleterious | D | 0.70612542 | None | None | I |
G/T | 0.9876 | likely_pathogenic | 0.9814 | pathogenic | -0.921 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
G/V | 0.9933 | likely_pathogenic | 0.9898 | pathogenic | -0.477 | Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.805342699 | None | None | I |
G/W | 0.9934 | likely_pathogenic | 0.9905 | pathogenic | -1.285 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | I |
G/Y | 0.995 | likely_pathogenic | 0.9916 | pathogenic | -0.963 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.