Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16370 | 49333;49334;49335 | chr2:178614289;178614288;178614287 | chr2:179479016;179479015;179479014 |
N2AB | 14729 | 44410;44411;44412 | chr2:178614289;178614288;178614287 | chr2:179479016;179479015;179479014 |
N2A | 13802 | 41629;41630;41631 | chr2:178614289;178614288;178614287 | chr2:179479016;179479015;179479014 |
N2B | 7305 | 22138;22139;22140 | chr2:178614289;178614288;178614287 | chr2:179479016;179479015;179479014 |
Novex-1 | 7430 | 22513;22514;22515 | chr2:178614289;178614288;178614287 | chr2:179479016;179479015;179479014 |
Novex-2 | 7497 | 22714;22715;22716 | chr2:178614289;178614288;178614287 | chr2:179479016;179479015;179479014 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | D | 0.922 | 0.713 | 0.884904973826 | gnomAD-4.0.0 | 1.59322E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78505E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9549 | likely_pathogenic | 0.9408 | pathogenic | -2.374 | Highly Destabilizing | 0.999 | D | 0.7 | prob.neutral | None | None | None | None | N |
L/C | 0.8802 | likely_pathogenic | 0.8583 | pathogenic | -1.216 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
L/D | 0.9999 | likely_pathogenic | 0.9998 | pathogenic | -2.927 | Highly Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
L/E | 0.999 | likely_pathogenic | 0.9987 | pathogenic | -2.608 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
L/F | 0.6015 | likely_pathogenic | 0.5558 | ambiguous | -1.405 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
L/G | 0.9947 | likely_pathogenic | 0.9924 | pathogenic | -2.943 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
L/H | 0.9964 | likely_pathogenic | 0.9949 | pathogenic | -2.85 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
L/I | 0.202 | likely_benign | 0.194 | benign | -0.639 | Destabilizing | 0.999 | D | 0.536 | neutral | D | 0.578341333 | None | None | N |
L/K | 0.9981 | likely_pathogenic | 0.9974 | pathogenic | -1.614 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
L/M | 0.3318 | likely_benign | 0.3178 | benign | -0.846 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
L/N | 0.999 | likely_pathogenic | 0.9987 | pathogenic | -2.399 | Highly Destabilizing | 1.0 | D | 0.923 | deleterious | None | None | None | None | N |
L/P | 0.9976 | likely_pathogenic | 0.9963 | pathogenic | -1.213 | Destabilizing | 1.0 | D | 0.922 | deleterious | D | 0.814198315 | None | None | N |
L/Q | 0.9941 | likely_pathogenic | 0.9922 | pathogenic | -1.947 | Destabilizing | 1.0 | D | 0.915 | deleterious | D | 0.814198315 | None | None | N |
L/R | 0.996 | likely_pathogenic | 0.9945 | pathogenic | -1.995 | Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.814198315 | None | None | N |
L/S | 0.9971 | likely_pathogenic | 0.996 | pathogenic | -2.767 | Highly Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
L/T | 0.9881 | likely_pathogenic | 0.9842 | pathogenic | -2.285 | Highly Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
L/V | 0.2505 | likely_benign | 0.2314 | benign | -1.213 | Destabilizing | 0.999 | D | 0.558 | neutral | N | 0.486038895 | None | None | N |
L/W | 0.9849 | likely_pathogenic | 0.9786 | pathogenic | -1.671 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
L/Y | 0.9847 | likely_pathogenic | 0.9789 | pathogenic | -1.563 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.