Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16371 | 49336;49337;49338 | chr2:178614286;178614285;178614284 | chr2:179479013;179479012;179479011 |
N2AB | 14730 | 44413;44414;44415 | chr2:178614286;178614285;178614284 | chr2:179479013;179479012;179479011 |
N2A | 13803 | 41632;41633;41634 | chr2:178614286;178614285;178614284 | chr2:179479013;179479012;179479011 |
N2B | 7306 | 22141;22142;22143 | chr2:178614286;178614285;178614284 | chr2:179479013;179479012;179479011 |
Novex-1 | 7431 | 22516;22517;22518 | chr2:178614286;178614285;178614284 | chr2:179479013;179479012;179479011 |
Novex-2 | 7498 | 22717;22718;22719 | chr2:178614286;178614285;178614284 | chr2:179479013;179479012;179479011 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.994 | N | 0.609 | 0.418 | 0.596538173739 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/R | None | None | 0.994 | N | 0.654 | 0.456 | 0.671773944551 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0952 | likely_benign | 0.0937 | benign | -1.131 | Destabilizing | 0.122 | N | 0.235 | neutral | N | 0.444831641 | None | None | N |
T/C | 0.3802 | ambiguous | 0.3437 | ambiguous | -0.694 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
T/D | 0.6487 | likely_pathogenic | 0.6253 | pathogenic | -1.526 | Destabilizing | 0.996 | D | 0.609 | neutral | None | None | None | None | N |
T/E | 0.452 | ambiguous | 0.4466 | ambiguous | -1.298 | Destabilizing | 0.985 | D | 0.555 | neutral | None | None | None | None | N |
T/F | 0.2701 | likely_benign | 0.2582 | benign | -0.845 | Destabilizing | 0.999 | D | 0.744 | deleterious | None | None | None | None | N |
T/G | 0.332 | likely_benign | 0.3206 | benign | -1.554 | Destabilizing | 0.942 | D | 0.561 | neutral | None | None | None | None | N |
T/H | 0.2279 | likely_benign | 0.2131 | benign | -1.682 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
T/I | 0.1943 | likely_benign | 0.187 | benign | -0.008 | Destabilizing | 0.994 | D | 0.609 | neutral | N | 0.470160018 | None | None | N |
T/K | 0.2022 | likely_benign | 0.1868 | benign | -0.278 | Destabilizing | 0.961 | D | 0.573 | neutral | N | 0.469398168 | None | None | N |
T/L | 0.1159 | likely_benign | 0.1102 | benign | -0.008 | Destabilizing | 0.97 | D | 0.477 | neutral | None | None | None | None | N |
T/M | 0.0985 | likely_benign | 0.1005 | benign | -0.112 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
T/N | 0.1569 | likely_benign | 0.1445 | benign | -1.068 | Destabilizing | 0.999 | D | 0.527 | neutral | None | None | None | None | N |
T/P | 0.8496 | likely_pathogenic | 0.8532 | pathogenic | -0.352 | Destabilizing | 0.994 | D | 0.603 | neutral | D | 0.632542723 | None | None | N |
T/Q | 0.2155 | likely_benign | 0.2107 | benign | -0.774 | Destabilizing | 0.999 | D | 0.668 | neutral | None | None | None | None | N |
T/R | 0.1782 | likely_benign | 0.1665 | benign | -0.613 | Destabilizing | 0.994 | D | 0.654 | neutral | N | 0.466725835 | None | None | N |
T/S | 0.1053 | likely_benign | 0.1009 | benign | -1.27 | Destabilizing | 0.835 | D | 0.499 | neutral | N | 0.400431936 | None | None | N |
T/V | 0.1576 | likely_benign | 0.145 | benign | -0.352 | Destabilizing | 0.97 | D | 0.459 | neutral | None | None | None | None | N |
T/W | 0.6698 | likely_pathogenic | 0.6654 | pathogenic | -1.06 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
T/Y | 0.3193 | likely_benign | 0.3071 | benign | -0.626 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.