Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16374 | 49345;49346;49347 | chr2:178614277;178614276;178614275 | chr2:179479004;179479003;179479002 |
N2AB | 14733 | 44422;44423;44424 | chr2:178614277;178614276;178614275 | chr2:179479004;179479003;179479002 |
N2A | 13806 | 41641;41642;41643 | chr2:178614277;178614276;178614275 | chr2:179479004;179479003;179479002 |
N2B | 7309 | 22150;22151;22152 | chr2:178614277;178614276;178614275 | chr2:179479004;179479003;179479002 |
Novex-1 | 7434 | 22525;22526;22527 | chr2:178614277;178614276;178614275 | chr2:179479004;179479003;179479002 |
Novex-2 | 7501 | 22726;22727;22728 | chr2:178614277;178614276;178614275 | chr2:179479004;179479003;179479002 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 1.0 | D | 0.864 | 0.462 | 0.452737964553 | gnomAD-4.0.0 | 1.59331E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43328E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1061 | likely_benign | 0.0938 | benign | -1.664 | Destabilizing | 1.0 | D | 0.819 | deleterious | N | 0.487440911 | None | None | N |
P/C | 0.6986 | likely_pathogenic | 0.6414 | pathogenic | -1.097 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
P/D | 0.8536 | likely_pathogenic | 0.8136 | pathogenic | -1.772 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
P/E | 0.5051 | ambiguous | 0.4377 | ambiguous | -1.701 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
P/F | 0.7537 | likely_pathogenic | 0.6882 | pathogenic | -1.197 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
P/G | 0.6986 | likely_pathogenic | 0.61 | pathogenic | -2.04 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
P/H | 0.4308 | ambiguous | 0.3891 | ambiguous | -1.55 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
P/I | 0.3785 | ambiguous | 0.3404 | ambiguous | -0.694 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
P/K | 0.4796 | ambiguous | 0.4088 | ambiguous | -1.471 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
P/L | 0.1923 | likely_benign | 0.1661 | benign | -0.694 | Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.650200772 | None | None | N |
P/M | 0.4205 | ambiguous | 0.3796 | ambiguous | -0.571 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
P/N | 0.7049 | likely_pathogenic | 0.6542 | pathogenic | -1.393 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
P/Q | 0.2997 | likely_benign | 0.2594 | benign | -1.464 | Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.538981682 | None | None | N |
P/R | 0.413 | ambiguous | 0.3597 | ambiguous | -1.013 | Destabilizing | 1.0 | D | 0.895 | deleterious | D | 0.599252272 | None | None | N |
P/S | 0.2854 | likely_benign | 0.2396 | benign | -1.896 | Destabilizing | 1.0 | D | 0.864 | deleterious | D | 0.584605025 | None | None | N |
P/T | 0.2262 | likely_benign | 0.2055 | benign | -1.7 | Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.618258752 | None | None | N |
P/V | 0.2812 | likely_benign | 0.254 | benign | -0.985 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
P/W | 0.9235 | likely_pathogenic | 0.8968 | pathogenic | -1.463 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
P/Y | 0.7627 | likely_pathogenic | 0.697 | pathogenic | -1.147 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.