Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16382 | 49369;49370;49371 | chr2:178614253;178614252;178614251 | chr2:179478980;179478979;179478978 |
N2AB | 14741 | 44446;44447;44448 | chr2:178614253;178614252;178614251 | chr2:179478980;179478979;179478978 |
N2A | 13814 | 41665;41666;41667 | chr2:178614253;178614252;178614251 | chr2:179478980;179478979;179478978 |
N2B | 7317 | 22174;22175;22176 | chr2:178614253;178614252;178614251 | chr2:179478980;179478979;179478978 |
Novex-1 | 7442 | 22549;22550;22551 | chr2:178614253;178614252;178614251 | chr2:179478980;179478979;179478978 |
Novex-2 | 7509 | 22750;22751;22752 | chr2:178614253;178614252;178614251 | chr2:179478980;179478979;179478978 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.135 | N | 0.193 | 0.052 | 0.245660935333 | gnomAD-4.0.0 | 2.73848E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69935E-06 | 0 | 1.65854E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3402 | ambiguous | 0.293 | benign | 0.073 | Stabilizing | 0.985 | D | 0.587 | neutral | None | None | None | None | I |
K/C | 0.7467 | likely_pathogenic | 0.6871 | pathogenic | -0.159 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | I |
K/D | 0.5623 | ambiguous | 0.5153 | ambiguous | -0.098 | Destabilizing | 0.998 | D | 0.532 | neutral | None | None | None | None | I |
K/E | 0.2208 | likely_benign | 0.1935 | benign | -0.106 | Destabilizing | 0.98 | D | 0.567 | neutral | N | 0.403429492 | None | None | I |
K/F | 0.8513 | likely_pathogenic | 0.7891 | pathogenic | -0.213 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
K/G | 0.5218 | ambiguous | 0.4612 | ambiguous | -0.085 | Destabilizing | 0.993 | D | 0.545 | neutral | None | None | None | None | I |
K/H | 0.3806 | ambiguous | 0.3393 | benign | -0.264 | Destabilizing | 1.0 | D | 0.569 | neutral | None | None | None | None | I |
K/I | 0.4286 | ambiguous | 0.3795 | ambiguous | 0.409 | Stabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | I |
K/L | 0.4186 | ambiguous | 0.3571 | ambiguous | 0.409 | Stabilizing | 0.993 | D | 0.537 | neutral | None | None | None | None | I |
K/M | 0.3349 | likely_benign | 0.2775 | benign | 0.122 | Stabilizing | 1.0 | D | 0.569 | neutral | N | 0.481673934 | None | None | I |
K/N | 0.4257 | ambiguous | 0.3902 | ambiguous | 0.306 | Stabilizing | 0.997 | D | 0.517 | neutral | N | 0.467844833 | None | None | I |
K/P | 0.4083 | ambiguous | 0.3646 | ambiguous | 0.322 | Stabilizing | 0.323 | N | 0.375 | neutral | None | None | None | None | I |
K/Q | 0.1646 | likely_benign | 0.148 | benign | 0.139 | Stabilizing | 0.994 | D | 0.551 | neutral | N | 0.479249 | None | None | I |
K/R | 0.0869 | likely_benign | 0.0825 | benign | 0.064 | Stabilizing | 0.135 | N | 0.193 | neutral | N | 0.472478946 | None | None | I |
K/S | 0.4474 | ambiguous | 0.3968 | ambiguous | -0.101 | Destabilizing | 0.993 | D | 0.549 | neutral | None | None | None | None | I |
K/T | 0.2184 | likely_benign | 0.1924 | benign | 0.021 | Stabilizing | 0.997 | D | 0.531 | neutral | N | 0.479626016 | None | None | I |
K/V | 0.3426 | ambiguous | 0.3008 | benign | 0.322 | Stabilizing | 0.998 | D | 0.571 | neutral | None | None | None | None | I |
K/W | 0.8662 | likely_pathogenic | 0.8086 | pathogenic | -0.287 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
K/Y | 0.7475 | likely_pathogenic | 0.6773 | pathogenic | 0.071 | Stabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.