Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16387 | 49384;49385;49386 | chr2:178614238;178614237;178614236 | chr2:179478965;179478964;179478963 |
N2AB | 14746 | 44461;44462;44463 | chr2:178614238;178614237;178614236 | chr2:179478965;179478964;179478963 |
N2A | 13819 | 41680;41681;41682 | chr2:178614238;178614237;178614236 | chr2:179478965;179478964;179478963 |
N2B | 7322 | 22189;22190;22191 | chr2:178614238;178614237;178614236 | chr2:179478965;179478964;179478963 |
Novex-1 | 7447 | 22564;22565;22566 | chr2:178614238;178614237;178614236 | chr2:179478965;179478964;179478963 |
Novex-2 | 7514 | 22765;22766;22767 | chr2:178614238;178614237;178614236 | chr2:179478965;179478964;179478963 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs765925142 | -2.437 | 0.104 | N | 0.634 | 0.262 | 0.537262924806 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.65E-05 | None | 0 | None | 0 | 0 | 0 |
V/A | rs765925142 | -2.437 | 0.104 | N | 0.634 | 0.262 | 0.537262924806 | gnomAD-4.0.0 | 1.59357E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86144E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6353 | likely_pathogenic | 0.545 | ambiguous | -2.117 | Highly Destabilizing | 0.104 | N | 0.634 | neutral | N | 0.477055728 | None | None | N |
V/C | 0.8606 | likely_pathogenic | 0.8203 | pathogenic | -1.978 | Destabilizing | 0.968 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/D | 0.9224 | likely_pathogenic | 0.8747 | pathogenic | -2.889 | Highly Destabilizing | 0.667 | D | 0.782 | deleterious | N | 0.517694114 | None | None | N |
V/E | 0.8127 | likely_pathogenic | 0.7473 | pathogenic | -2.786 | Highly Destabilizing | 0.726 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/F | 0.4399 | ambiguous | 0.3953 | ambiguous | -1.423 | Destabilizing | 0.497 | N | 0.708 | prob.delet. | N | 0.471485966 | None | None | N |
V/G | 0.8232 | likely_pathogenic | 0.7482 | pathogenic | -2.53 | Highly Destabilizing | 0.667 | D | 0.752 | deleterious | D | 0.586077235 | None | None | N |
V/H | 0.8729 | likely_pathogenic | 0.8365 | pathogenic | -1.978 | Destabilizing | 0.968 | D | 0.776 | deleterious | None | None | None | None | N |
V/I | 0.0693 | likely_benign | 0.0704 | benign | -1.01 | Destabilizing | None | N | 0.238 | neutral | N | 0.391433545 | None | None | N |
V/K | 0.8282 | likely_pathogenic | 0.7697 | pathogenic | -1.82 | Destabilizing | 0.726 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/L | 0.3976 | ambiguous | 0.3596 | ambiguous | -1.01 | Destabilizing | 0.009 | N | 0.448 | neutral | N | 0.465709643 | None | None | N |
V/M | 0.2902 | likely_benign | 0.2526 | benign | -1.089 | Destabilizing | 0.567 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/N | 0.7707 | likely_pathogenic | 0.698 | pathogenic | -1.965 | Destabilizing | 0.89 | D | 0.801 | deleterious | None | None | None | None | N |
V/P | 0.9952 | likely_pathogenic | 0.9931 | pathogenic | -1.351 | Destabilizing | 0.89 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/Q | 0.759 | likely_pathogenic | 0.6986 | pathogenic | -2.043 | Highly Destabilizing | 0.89 | D | 0.735 | prob.delet. | None | None | None | None | N |
V/R | 0.7478 | likely_pathogenic | 0.6795 | pathogenic | -1.342 | Destabilizing | 0.726 | D | 0.802 | deleterious | None | None | None | None | N |
V/S | 0.6649 | likely_pathogenic | 0.582 | pathogenic | -2.51 | Highly Destabilizing | 0.726 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/T | 0.3977 | ambiguous | 0.3329 | benign | -2.291 | Highly Destabilizing | 0.272 | N | 0.653 | neutral | None | None | None | None | N |
V/W | 0.94 | likely_pathogenic | 0.9255 | pathogenic | -1.751 | Destabilizing | 0.968 | D | 0.74 | deleterious | None | None | None | None | N |
V/Y | 0.825 | likely_pathogenic | 0.7806 | pathogenic | -1.468 | Destabilizing | 0.726 | D | 0.722 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.