Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16396 | 49411;49412;49413 | chr2:178614211;178614210;178614209 | chr2:179478938;179478937;179478936 |
N2AB | 14755 | 44488;44489;44490 | chr2:178614211;178614210;178614209 | chr2:179478938;179478937;179478936 |
N2A | 13828 | 41707;41708;41709 | chr2:178614211;178614210;178614209 | chr2:179478938;179478937;179478936 |
N2B | 7331 | 22216;22217;22218 | chr2:178614211;178614210;178614209 | chr2:179478938;179478937;179478936 |
Novex-1 | 7456 | 22591;22592;22593 | chr2:178614211;178614210;178614209 | chr2:179478938;179478937;179478936 |
Novex-2 | 7523 | 22792;22793;22794 | chr2:178614211;178614210;178614209 | chr2:179478938;179478937;179478936 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.334 | N | 0.543 | 0.242 | 0.285698343383 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1429 | likely_benign | 0.1403 | benign | -0.072 | Destabilizing | 0.334 | N | 0.547 | neutral | N | 0.484602361 | None | None | N |
E/C | 0.799 | likely_pathogenic | 0.7875 | pathogenic | -0.237 | Destabilizing | 0.982 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/D | 0.0799 | likely_benign | 0.0839 | benign | -0.358 | Destabilizing | 0.001 | N | 0.389 | neutral | N | 0.474281563 | None | None | N |
E/F | 0.722 | likely_pathogenic | 0.7129 | pathogenic | -0.057 | Destabilizing | 0.982 | D | 0.624 | neutral | None | None | None | None | N |
E/G | 0.1597 | likely_benign | 0.1559 | benign | -0.195 | Destabilizing | 0.334 | N | 0.441 | neutral | N | 0.462473847 | None | None | N |
E/H | 0.4271 | ambiguous | 0.4357 | ambiguous | 0.564 | Stabilizing | 0.947 | D | 0.59 | neutral | None | None | None | None | N |
E/I | 0.3541 | ambiguous | 0.3549 | ambiguous | 0.198 | Stabilizing | 0.826 | D | 0.63 | neutral | None | None | None | None | N |
E/K | 0.1643 | likely_benign | 0.1675 | benign | 0.411 | Stabilizing | 0.334 | N | 0.543 | neutral | N | 0.43684976 | None | None | N |
E/L | 0.351 | ambiguous | 0.3526 | ambiguous | 0.198 | Stabilizing | 0.7 | D | 0.616 | neutral | None | None | None | None | N |
E/M | 0.4266 | ambiguous | 0.4218 | ambiguous | -0.025 | Destabilizing | 0.982 | D | 0.595 | neutral | None | None | None | None | N |
E/N | 0.1743 | likely_benign | 0.1731 | benign | 0.087 | Stabilizing | 0.539 | D | 0.527 | neutral | None | None | None | None | N |
E/P | 0.3326 | likely_benign | 0.3399 | benign | 0.126 | Stabilizing | 0.826 | D | 0.557 | neutral | None | None | None | None | N |
E/Q | 0.1786 | likely_benign | 0.1876 | benign | 0.107 | Stabilizing | 0.638 | D | 0.522 | neutral | N | 0.47946017 | None | None | N |
E/R | 0.3078 | likely_benign | 0.3172 | benign | 0.671 | Stabilizing | 0.7 | D | 0.572 | neutral | None | None | None | None | N |
E/S | 0.1528 | likely_benign | 0.1535 | benign | -0.034 | Destabilizing | 0.25 | N | 0.534 | neutral | None | None | None | None | N |
E/T | 0.175 | likely_benign | 0.1755 | benign | 0.078 | Stabilizing | 0.7 | D | 0.531 | neutral | None | None | None | None | N |
E/V | 0.2138 | likely_benign | 0.2129 | benign | 0.126 | Stabilizing | 0.781 | D | 0.567 | neutral | N | 0.48658697 | None | None | N |
E/W | 0.8848 | likely_pathogenic | 0.8808 | pathogenic | 0.013 | Stabilizing | 0.982 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/Y | 0.6028 | likely_pathogenic | 0.5903 | pathogenic | 0.172 | Stabilizing | 0.982 | D | 0.583 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.