Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16401 | 49426;49427;49428 | chr2:178614196;178614195;178614194 | chr2:179478923;179478922;179478921 |
N2AB | 14760 | 44503;44504;44505 | chr2:178614196;178614195;178614194 | chr2:179478923;179478922;179478921 |
N2A | 13833 | 41722;41723;41724 | chr2:178614196;178614195;178614194 | chr2:179478923;179478922;179478921 |
N2B | 7336 | 22231;22232;22233 | chr2:178614196;178614195;178614194 | chr2:179478923;179478922;179478921 |
Novex-1 | 7461 | 22606;22607;22608 | chr2:178614196;178614195;178614194 | chr2:179478923;179478922;179478921 |
Novex-2 | 7528 | 22807;22808;22809 | chr2:178614196;178614195;178614194 | chr2:179478923;179478922;179478921 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 0.997 | D | 0.833 | 0.5 | 0.814810762646 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
L/V | rs794729447 | None | 0.117 | N | 0.416 | 0.128 | 0.447213685739 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/V | rs794729447 | None | 0.117 | N | 0.416 | 0.128 | 0.447213685739 | gnomAD-4.0.0 | 6.59031E-06 | None | None | None | None | N | None | 2.41838E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8238 | likely_pathogenic | 0.8261 | pathogenic | -1.416 | Destabilizing | 0.966 | D | 0.589 | neutral | None | None | None | None | N |
L/C | 0.8485 | likely_pathogenic | 0.8402 | pathogenic | -1.003 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
L/D | 0.9915 | likely_pathogenic | 0.9908 | pathogenic | -0.348 | Destabilizing | 0.999 | D | 0.838 | deleterious | None | None | None | None | N |
L/E | 0.9468 | likely_pathogenic | 0.9405 | pathogenic | -0.266 | Destabilizing | 0.998 | D | 0.822 | deleterious | None | None | None | None | N |
L/F | 0.552 | ambiguous | 0.561 | ambiguous | -0.725 | Destabilizing | 0.993 | D | 0.771 | deleterious | N | 0.496698461 | None | None | N |
L/G | 0.9767 | likely_pathogenic | 0.9755 | pathogenic | -1.789 | Destabilizing | 0.998 | D | 0.818 | deleterious | None | None | None | None | N |
L/H | 0.9184 | likely_pathogenic | 0.9163 | pathogenic | -0.825 | Destabilizing | 1.0 | D | 0.821 | deleterious | N | 0.469321437 | None | None | N |
L/I | 0.1106 | likely_benign | 0.1098 | benign | -0.442 | Destabilizing | 0.955 | D | 0.487 | neutral | N | 0.479973241 | None | None | N |
L/K | 0.9506 | likely_pathogenic | 0.9478 | pathogenic | -0.841 | Destabilizing | 0.998 | D | 0.805 | deleterious | None | None | None | None | N |
L/M | 0.2284 | likely_benign | 0.2413 | benign | -0.543 | Destabilizing | 0.998 | D | 0.747 | deleterious | None | None | None | None | N |
L/N | 0.9558 | likely_pathogenic | 0.9544 | pathogenic | -0.889 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
L/P | 0.9767 | likely_pathogenic | 0.9774 | pathogenic | -0.736 | Destabilizing | 0.999 | D | 0.834 | deleterious | D | 0.6259028 | None | None | N |
L/Q | 0.852 | likely_pathogenic | 0.8492 | pathogenic | -0.875 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
L/R | 0.9374 | likely_pathogenic | 0.9337 | pathogenic | -0.474 | Destabilizing | 0.997 | D | 0.833 | deleterious | D | 0.596685203 | None | None | N |
L/S | 0.9484 | likely_pathogenic | 0.9497 | pathogenic | -1.62 | Destabilizing | 0.998 | D | 0.807 | deleterious | None | None | None | None | N |
L/T | 0.8206 | likely_pathogenic | 0.8217 | pathogenic | -1.396 | Destabilizing | 0.995 | D | 0.762 | deleterious | None | None | None | None | N |
L/V | 0.1454 | likely_benign | 0.1498 | benign | -0.736 | Destabilizing | 0.117 | N | 0.416 | neutral | N | 0.391308452 | None | None | N |
L/W | 0.8747 | likely_pathogenic | 0.8687 | pathogenic | -0.815 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
L/Y | 0.8633 | likely_pathogenic | 0.852 | pathogenic | -0.559 | Destabilizing | 0.998 | D | 0.846 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.