Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16406 | 49441;49442;49443 | chr2:178614181;178614180;178614179 | chr2:179478908;179478907;179478906 |
N2AB | 14765 | 44518;44519;44520 | chr2:178614181;178614180;178614179 | chr2:179478908;179478907;179478906 |
N2A | 13838 | 41737;41738;41739 | chr2:178614181;178614180;178614179 | chr2:179478908;179478907;179478906 |
N2B | 7341 | 22246;22247;22248 | chr2:178614181;178614180;178614179 | chr2:179478908;179478907;179478906 |
Novex-1 | 7466 | 22621;22622;22623 | chr2:178614181;178614180;178614179 | chr2:179478908;179478907;179478906 |
Novex-2 | 7533 | 22822;22823;22824 | chr2:178614181;178614180;178614179 | chr2:179478908;179478907;179478906 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.999 | N | 0.587 | 0.284 | 0.413635276047 | gnomAD-4.0.0 | 1.59385E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86184E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6495 | likely_pathogenic | 0.5764 | pathogenic | -0.085 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
K/C | 0.8712 | likely_pathogenic | 0.8516 | pathogenic | -0.281 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/D | 0.8931 | likely_pathogenic | 0.869 | pathogenic | 0.2 | Stabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
K/E | 0.4645 | ambiguous | 0.4033 | ambiguous | 0.223 | Stabilizing | 0.999 | D | 0.64 | neutral | N | 0.477576763 | None | None | N |
K/F | 0.9469 | likely_pathogenic | 0.9301 | pathogenic | -0.226 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
K/G | 0.7639 | likely_pathogenic | 0.708 | pathogenic | -0.31 | Destabilizing | 1.0 | D | 0.604 | neutral | None | None | None | None | N |
K/H | 0.615 | likely_pathogenic | 0.5779 | pathogenic | -0.596 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
K/I | 0.6795 | likely_pathogenic | 0.6308 | pathogenic | 0.434 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
K/L | 0.6651 | likely_pathogenic | 0.6124 | pathogenic | 0.434 | Stabilizing | 1.0 | D | 0.604 | neutral | None | None | None | None | N |
K/M | 0.4978 | ambiguous | 0.4453 | ambiguous | 0.214 | Stabilizing | 1.0 | D | 0.665 | neutral | D | 0.627475533 | None | None | N |
K/N | 0.7694 | likely_pathogenic | 0.7257 | pathogenic | 0.136 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | N | 0.46980147 | None | None | N |
K/P | 0.8472 | likely_pathogenic | 0.8076 | pathogenic | 0.29 | Stabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
K/Q | 0.2723 | likely_benign | 0.2428 | benign | -0.011 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | N | 0.475056459 | None | None | N |
K/R | 0.1057 | likely_benign | 0.1022 | benign | -0.112 | Destabilizing | 0.999 | D | 0.587 | neutral | N | 0.474990391 | None | None | N |
K/S | 0.7383 | likely_pathogenic | 0.6808 | pathogenic | -0.405 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/T | 0.3632 | ambiguous | 0.3091 | benign | -0.218 | Destabilizing | 1.0 | D | 0.665 | neutral | N | 0.462479283 | None | None | N |
K/V | 0.6352 | likely_pathogenic | 0.586 | pathogenic | 0.29 | Stabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | N |
K/W | 0.9214 | likely_pathogenic | 0.9054 | pathogenic | -0.211 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/Y | 0.8984 | likely_pathogenic | 0.8809 | pathogenic | 0.136 | Stabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.