Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16407 | 49444;49445;49446 | chr2:178614178;178614177;178614176 | chr2:179478905;179478904;179478903 |
N2AB | 14766 | 44521;44522;44523 | chr2:178614178;178614177;178614176 | chr2:179478905;179478904;179478903 |
N2A | 13839 | 41740;41741;41742 | chr2:178614178;178614177;178614176 | chr2:179478905;179478904;179478903 |
N2B | 7342 | 22249;22250;22251 | chr2:178614178;178614177;178614176 | chr2:179478905;179478904;179478903 |
Novex-1 | 7467 | 22624;22625;22626 | chr2:178614178;178614177;178614176 | chr2:179478905;179478904;179478903 |
Novex-2 | 7534 | 22825;22826;22827 | chr2:178614178;178614177;178614176 | chr2:179478905;179478904;179478903 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | None | None | 0.989 | D | 0.441 | 0.326 | 0.570648228706 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1324 | likely_benign | 0.1244 | benign | -0.135 | Destabilizing | 0.801 | D | 0.43 | neutral | N | 0.467444212 | None | None | N |
D/C | 0.6032 | likely_pathogenic | 0.603 | pathogenic | -0.15 | Destabilizing | 0.998 | D | 0.449 | neutral | None | None | None | None | N |
D/E | 0.1034 | likely_benign | 0.0987 | benign | -0.378 | Destabilizing | 0.012 | N | 0.111 | neutral | N | 0.445107015 | None | None | N |
D/F | 0.5932 | likely_pathogenic | 0.5707 | pathogenic | 0.152 | Stabilizing | 0.949 | D | 0.44 | neutral | None | None | None | None | N |
D/G | 0.1196 | likely_benign | 0.1156 | benign | -0.379 | Destabilizing | 0.891 | D | 0.42 | neutral | N | 0.461070529 | None | None | N |
D/H | 0.3013 | likely_benign | 0.2829 | benign | 0.409 | Stabilizing | 0.966 | D | 0.419 | neutral | N | 0.479254883 | None | None | N |
D/I | 0.3521 | ambiguous | 0.34 | ambiguous | 0.472 | Stabilizing | 0.904 | D | 0.425 | neutral | None | None | None | None | N |
D/K | 0.3154 | likely_benign | 0.2921 | benign | 0.207 | Stabilizing | 0.728 | D | 0.433 | neutral | None | None | None | None | N |
D/L | 0.3635 | ambiguous | 0.3395 | benign | 0.472 | Stabilizing | 0.016 | N | 0.321 | neutral | None | None | None | None | N |
D/M | 0.5077 | ambiguous | 0.4846 | ambiguous | 0.413 | Stabilizing | 0.949 | D | 0.429 | neutral | None | None | None | None | N |
D/N | 0.0933 | likely_benign | 0.0904 | benign | -0.243 | Destabilizing | 0.801 | D | 0.415 | neutral | N | 0.479814933 | None | None | N |
D/P | 0.8894 | likely_pathogenic | 0.8737 | pathogenic | 0.294 | Stabilizing | 0.974 | D | 0.445 | neutral | None | None | None | None | N |
D/Q | 0.26 | likely_benign | 0.2361 | benign | -0.153 | Destabilizing | 0.172 | N | 0.109 | neutral | None | None | None | None | N |
D/R | 0.4198 | ambiguous | 0.3829 | ambiguous | 0.52 | Stabilizing | 0.949 | D | 0.429 | neutral | None | None | None | None | N |
D/S | 0.1157 | likely_benign | 0.1137 | benign | -0.354 | Destabilizing | 0.842 | D | 0.347 | neutral | None | None | None | None | N |
D/T | 0.1811 | likely_benign | 0.1763 | benign | -0.153 | Destabilizing | 0.842 | D | 0.461 | neutral | None | None | None | None | N |
D/V | 0.1959 | likely_benign | 0.1941 | benign | 0.294 | Stabilizing | 0.669 | D | 0.452 | neutral | N | 0.479677753 | None | None | N |
D/W | 0.9027 | likely_pathogenic | 0.8852 | pathogenic | 0.302 | Stabilizing | 0.998 | D | 0.547 | neutral | None | None | None | None | N |
D/Y | 0.2643 | likely_benign | 0.2492 | benign | 0.402 | Stabilizing | 0.989 | D | 0.441 | neutral | D | 0.536942627 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.