Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16414 | 49465;49466;49467 | chr2:178614157;178614156;178614155 | chr2:179478884;179478883;179478882 |
N2AB | 14773 | 44542;44543;44544 | chr2:178614157;178614156;178614155 | chr2:179478884;179478883;179478882 |
N2A | 13846 | 41761;41762;41763 | chr2:178614157;178614156;178614155 | chr2:179478884;179478883;179478882 |
N2B | 7349 | 22270;22271;22272 | chr2:178614157;178614156;178614155 | chr2:179478884;179478883;179478882 |
Novex-1 | 7474 | 22645;22646;22647 | chr2:178614157;178614156;178614155 | chr2:179478884;179478883;179478882 |
Novex-2 | 7541 | 22846;22847;22848 | chr2:178614157;178614156;178614155 | chr2:179478884;179478883;179478882 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1329659749 | 0.272 | 0.801 | N | 0.395 | 0.149 | 0.28297238246 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/R | rs1329659749 | 0.272 | 0.801 | N | 0.395 | 0.149 | 0.28297238246 | gnomAD-4.0.0 | 2.73877E-06 | None | None | None | None | N | None | 0 | 4.48209E-05 | None | 0 | 0 | None | 0 | 0 | 8.99826E-07 | 1.15974E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4819 | ambiguous | 0.4708 | ambiguous | 0.045 | Stabilizing | 0.688 | D | 0.375 | neutral | None | None | None | None | N |
K/C | 0.7282 | likely_pathogenic | 0.7172 | pathogenic | -0.368 | Destabilizing | 0.998 | D | 0.417 | neutral | None | None | None | None | N |
K/D | 0.6139 | likely_pathogenic | 0.6141 | pathogenic | -0.09 | Destabilizing | 0.016 | N | 0.219 | neutral | None | None | None | None | N |
K/E | 0.4054 | ambiguous | 0.4311 | ambiguous | -0.103 | Destabilizing | 0.454 | N | 0.347 | neutral | N | 0.46739332 | None | None | N |
K/F | 0.8873 | likely_pathogenic | 0.8848 | pathogenic | -0.273 | Destabilizing | 0.991 | D | 0.447 | neutral | None | None | None | None | N |
K/G | 0.4329 | ambiguous | 0.4225 | ambiguous | -0.093 | Destabilizing | 0.002 | N | 0.184 | neutral | None | None | None | None | N |
K/H | 0.2768 | likely_benign | 0.2769 | benign | -0.205 | Destabilizing | 0.974 | D | 0.435 | neutral | None | None | None | None | N |
K/I | 0.7504 | likely_pathogenic | 0.7507 | pathogenic | 0.323 | Stabilizing | 0.966 | D | 0.467 | neutral | D | 0.564613887 | None | None | N |
K/L | 0.6152 | likely_pathogenic | 0.6035 | pathogenic | 0.323 | Stabilizing | 0.915 | D | 0.455 | neutral | None | None | None | None | N |
K/M | 0.4737 | ambiguous | 0.465 | ambiguous | 0.03 | Stabilizing | 0.998 | D | 0.425 | neutral | None | None | None | None | N |
K/N | 0.4106 | ambiguous | 0.3981 | ambiguous | 0.128 | Stabilizing | 0.005 | N | 0.135 | neutral | N | 0.439154313 | None | None | N |
K/P | 0.9086 | likely_pathogenic | 0.9145 | pathogenic | 0.255 | Stabilizing | 0.991 | D | 0.455 | neutral | None | None | None | None | N |
K/Q | 0.2027 | likely_benign | 0.2056 | benign | -0.035 | Destabilizing | 0.891 | D | 0.397 | neutral | N | 0.456655395 | None | None | N |
K/R | 0.0834 | likely_benign | 0.0874 | benign | -0.013 | Destabilizing | 0.801 | D | 0.395 | neutral | N | 0.466193887 | None | None | N |
K/S | 0.4683 | ambiguous | 0.4559 | ambiguous | -0.296 | Destabilizing | 0.525 | D | 0.325 | neutral | None | None | None | None | N |
K/T | 0.3738 | ambiguous | 0.3603 | ambiguous | -0.184 | Destabilizing | 0.801 | D | 0.445 | neutral | N | 0.513576123 | None | None | N |
K/V | 0.6401 | likely_pathogenic | 0.6451 | pathogenic | 0.255 | Stabilizing | 0.915 | D | 0.461 | neutral | None | None | None | None | N |
K/W | 0.8621 | likely_pathogenic | 0.8731 | pathogenic | -0.344 | Destabilizing | 0.998 | D | 0.474 | neutral | None | None | None | None | N |
K/Y | 0.6982 | likely_pathogenic | 0.7025 | pathogenic | 0.015 | Stabilizing | 0.991 | D | 0.437 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.